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S_p1_S3_coassembly_k141_274303

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_274303_1
AR19, Pacearchaeaota, DPANN, Archaea

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150..353
DNA (204bp) protein (68aa)
Tax=AR19
S_p1_S3_coassembly_k141_274303_2

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692..1630
DNA (939bp) protein (313aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Probable tRNA pseudouridine synthase B Tax=Thermococcaceae RepID=TRUB_PYRFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
S_p1_S3_coassembly_k141_274303_3
unknown

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comp(1627..1968)
DNA (342bp) protein (114aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_4
unknown

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comp(2049..4766)
DNA (2718bp) protein (906aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_5
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4766..6862)
DNA (2097bp) protein (699aa)
Type III restriction protein res subunit Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1Y0_ISOPI
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ADV62412.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
S_p1_S3_coassembly_k141_274303_6
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(6972..7337)
DNA (366bp) protein (122aa)
Putative nucleic acid-binding protein, contains PIN domain-containing protein Tax=Rhizobium sp. AP16 RepID=J2L470_9RHIZ
hypothetical protein
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_274303_7
unknown

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comp(7324..7542)
DNA (219bp) protein (73aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_8
unknown

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comp(7614..7898)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_9
unknown

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comp(8019..8453)
DNA (435bp) protein (145aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_10
CG_Woesearch_01, Woesearchaeota, Archaea

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8602..12126
DNA (3525bp) protein (1175aa)
Uncharacterized protein Tax=Eimeria mitis RepID=U6JRT5_9EIME
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_274303_11
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(12313..13707)
DNA (1395bp) protein (465aa)
Adenylosuccinate lyase bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
purB; adenylosuccinate lyase
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_274303_12
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13709..14959)
DNA (1251bp) protein (417aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Adenylosuccinate synthetase Tax=Geobacter sp. (strain M18) RepID=E8WQZ2_GEOS8
S_p1_S3_coassembly_k141_274303_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(15227..17197)
DNA (1971bp) protein (657aa)
Minimal nucleotidyltransferase fused to HEPN domain bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Minimal nucleotidyltransferase fused to HEPN protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_274303_14

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comp(17225..17968)
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51311.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p1_S3_coassembly_k141_274303_15
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(17975..18202)
DNA (228bp) protein (76aa)
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_274303_16
unknown

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18484..18924
DNA (441bp) protein (147aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_17
unknown

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19004..19402
DNA (399bp) protein (133aa)

This feature has no annotations

S_p1_S3_coassembly_k141_274303_18
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(19847..20920)
DNA (1074bp) protein (358aa)
cell division protein FtsZ; K03531 cell division protein FtsZ bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cell division protein FtsZ
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_274303_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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21542..22813
DNA (1272bp) protein (424aa)
MiaB-like tRNA modifying enzyme bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
MiaB-like tRNA modifying enzyme
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_274303_20
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23408..23635
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CNM7_SYNLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI02312.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S_p1_S3_coassembly_k141_274303_21

Not on your lists

comp(23850..25091)
DNA (1242bp) protein (414aa)
Glycosyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glycosyltransferase {ECO:0000313|EMBL:AJF61480.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
glycoside hydrolase
S_p1_S3_coassembly_k141_274303_22

Not on your lists

comp(25138..26187)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BDA7E
RNA-directed DNA polymerase Reverse transcriptase
RNA-directed DNA polymerase Reverse transcriptase {ECO:0000313|EMBL:AJF63168.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_274303_23
unknown

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comp(26630..27055)
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying 23 items

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