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S_p1_S3_coassembly_k141_1881648

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1881648_1
AR17, Woesearchaeaota, DPANN, Archaea

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391..699
DNA (309bp) protein (103aa)
Tax=AR17
S_p1_S3_coassembly_k141_1881648_2
unknown

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702..1037
DNA (336bp) protein (112aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_3
unknown

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1109..1879
DNA (771bp) protein (257aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_4
unknown

Not on your lists

comp(1918..2889)
DNA (972bp) protein (324aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_5
unknown

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comp(2968..4470)
DNA (1503bp) protein (501aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_6
unknown

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comp(4467..5240)
DNA (774bp) protein (258aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_7
unknown

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comp(5237..5887)
DNA (651bp) protein (217aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_8
unknown

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comp(5884..7998)
DNA (2115bp) protein (705aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_9
unknown

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comp(8147..8488)
DNA (342bp) protein (114aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_10
AR4, Woesearchaeaota, DPANN, Archaea

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8613..9554
DNA (942bp) protein (314aa)
phosphate uptake regulator PhoU bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S_p1_S3_coassembly_k141_1881648_11
unknown

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comp(9588..9845)
DNA (258bp) protein (86aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_12

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comp(9881..10564)
DNA (684bp) protein (228aa)
(S)-2-haloacid dehalogenase 1 Tax=Pseudomonas sp. (strain CBS-3) RepID=HAD1_PSEUC
Uncharacterized protein {ECO:0000313|EMBL:KKN95049.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
haloacid dehalogenase
S_p1_S3_coassembly_k141_1881648_13
unknown

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comp(10561..12066)
DNA (1506bp) protein (502aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_14
unknown

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comp(12070..15030)
DNA (2961bp) protein (987aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_15
unknown

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comp(15017..15424)
DNA (408bp) protein (136aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_16

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comp(15534..15806)
DNA (273bp) protein (91aa)
PilT protein-like protein Tax=Ferroplasma sp. Type II RepID=T0NI96_9EURY
Marine sediment metagenome DNA, contig: S01H4_S04034 {ECO:0000313|EMBL:GAG82691.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
twitching motility protein PilT
S_p1_S3_coassembly_k141_1881648_17
unknown

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15942..16472
DNA (531bp) protein (177aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16499..17635)
DNA (1137bp) protein (379aa)
Signal recognition particle GTPase Tax=sediment metagenome RepID=D9PEV9_9ZZZZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal recognition particle GTPase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1881648_19

Not on your lists

comp(17592..18011)
DNA (420bp) protein (140aa)
Prefoldin subunit alpha Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; species="Archaea.;" source="archaeon GW2011_AR16.;"
Prefoldin subunit alpha
S_p1_S3_coassembly_k141_1881648_20
unknown

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18187..20598
DNA (2412bp) protein (804aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_21

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20600..21970
DNA (1371bp) protein (457aa)
Marine sediment metagenome DNA, contig: S01H1_L07745 {ECO:0000313|EMBL:GAF76501.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1881648_22
unknown

Not on your lists

21967..23136
DNA (1170bp) protein (390aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262771F
S_p1_S3_coassembly_k141_1881648_23
unknown

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comp(23193..23477)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_24
unknown

Not on your lists

comp(23943..24494)
DNA (552bp) protein (184aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_25
unknown

Not on your lists

24575..25018
DNA (444bp) protein (148aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1881648_26
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25091..26083
DNA (993bp) protein (331aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1881648_27
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26189..26488
DNA (300bp) protein (100aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1A68
regulatory protein ArsR
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S_p1_S3_coassembly_k141_1881648_28
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

26512..26796
DNA (285bp) protein (95aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003760270
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_1881648_29

Not on your lists

26815..27642
DNA (828bp) protein (276aa)
Methyltransferase type 12 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ERF5_RUNSL
Type 12 methyltransferase {ECO:0000313|EMBL:KHO49673.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
type 12 methyltransferase
S_p1_S3_coassembly_k141_1881648_30
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(27906..29075)
DNA (1170bp) protein (390aa)
Filamentation induced by cAMP protein Fic Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FXK3_METM5
putative filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABO34937.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain C5 / ATCC BAA-1333).;"
Displaying 30 items

View Taxonomy