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S_p1_S3_coassembly_k141_1970375

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1970375_1
unknown

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272..637
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1970375_2
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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634..1107
DNA (474bp) protein (158aa)
Bifunctional protein RfaE, domain II {ECO:0000313|EMBL:EEO36609.1}; EC=2.7.7.- {ECO:0000313|EMBL:EEO36609.1};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
Bifunctional protein RfaE, domain II Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFF3_FUSMR
rfaE bifunctional protein
S_p1_S3_coassembly_k141_1970375_3
unknown

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1167..2048
DNA (882bp) protein (294aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1970375_4
CG_Woesearch_01, Woesearchaeota, Archaea

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2255..2812
DNA (558bp) protein (186aa)
DNA-directed RNA polymerase Tax=sediment metagenome RepID=D9PM39_9ZZZZ
DNA-directed RNA polymerase subunit E
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1970375_5

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2802..2987
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase, RpoE2, archaeal {ECO:0000313|EMBL:EFK95394.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EFK95394.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
DNA-directed RNA polymerase, RpoE2, archaeal Tax=sediment metagenome RepID=D9PM38_9ZZZZ
DNA-directed RNA polymerase, subunit E
S_p1_S3_coassembly_k141_1970375_6
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2984..3295
DNA (312bp) protein (104aa)
30S ribosomal protein S24e Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rps24e; 30S ribosomal protein S24
S_p1_S3_coassembly_k141_1970375_7
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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3296..3496
DNA (201bp) protein (67aa)
30S ribosomal protein S27ae Tax=sediment metagenome RepID=D9PM36_9ZZZZ
small subunit ribosomal protein S27Ae
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
S_p1_S3_coassembly_k141_1970375_8
unknown

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comp(3527..3910)
DNA (384bp) protein (128aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1970375_9
unknown

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4588..5577
DNA (990bp) protein (330aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1970375_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5601..6374)
DNA (774bp) protein (258aa)
Uncharacterized protein (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1970375_11
AR4, Woesearchaeaota, DPANN, Archaea

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comp(6377..6664)
DNA (288bp) protein (96aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12
Tax=AR4
S_p1_S3_coassembly_k141_1970375_12

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comp(6679..7446)
DNA (768bp) protein (256aa)
Ribosomal protein L10 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Ribosomal protein L10
S_p1_S3_coassembly_k141_1970375_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7443..8096)
DNA (654bp) protein (218aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L1
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1970375_14
unknown

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8387..9391
DNA (1005bp) protein (335aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1970375_15

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comp(9413..10108)
DNA (696bp) protein (232aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
S_p1_S3_coassembly_k141_1970375_16
AR4, Woesearchaeaota, DPANN, Archaea

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comp(10163..10660)
DNA (498bp) protein (166aa)
id=5041897 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p1_S3_coassembly_k141_1970375_17

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comp(10819..11088)
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; species="Archaea.;" source="archaeon GW2011_AR15.;"
DNA-directed RNA polymerase subunit L bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
S_p1_S3_coassembly_k141_1970375_18
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

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comp(11570..12214)
DNA (645bp) protein (215aa)
Putative glycosyltransferase Tax=Reinekea blandensis MED297 RepID=A4BKF0_9GAMM
Methyltransferase type 11 {ECO:0000313|EMBL:KKU03527.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
type 11 methyltransferase
S_p1_S3_coassembly_k141_1970375_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

12265..13212
DNA (948bp) protein (316aa)
Hexosyltransferase, glycosyltransferase Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4Y3_HALMT
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1970375_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(13178..13891)
DNA (714bp) protein (238aa)
Methyltransferase type 11 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
type 11 methyltransferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
S_p1_S3_coassembly_k141_1970375_21
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(13884..14534)
DNA (651bp) protein (217aa)
Methyltransferase type 11 {ECO:0000313|EMBL:KKR79167.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
methylase involved in ubiquinone/menaquinone biosynthesis
S_p1_S3_coassembly_k141_1970375_22
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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14698..16317
DNA (1620bp) protein (540aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50730.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
hypothetical protein
Displaying 22 items

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