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S_p1_S3_coassembly_k141_2117697

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2117697_1
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(83..1258)
DNA (1176bp) protein (392aa)
Radical SAM domain protein Tax=Acetobacter sp. CAG:267 RepID=R5XU07_9PROT
radical SAM protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p1_S3_coassembly_k141_2117697_2
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1289..2512)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein Tax=Streptomyces sp. Mg1 RepID=B4VGG2_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDX27049.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
integral membrane protein
S_p1_S3_coassembly_k141_2117697_3

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2639..3538
DNA (900bp) protein (300aa)
phosphate uptake regulator bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphate uptake regulator {ECO:0000313|EMBL:KHO46478.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_2117697_4
unknown

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comp(3525..4988)
DNA (1464bp) protein (488aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_5
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

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5067..5678
DNA (612bp) protein (204aa)
Inosine triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_03148}; Short=ITPase {ECO:0000256|HAMAP-Rule:MF_03148};; Short=Inosine triphosphatase {ECO:0000256|HAMAP-Rule:MF_03148};; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_03148};; Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_03148}; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_03148}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_03148}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_03148}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
Inosine triphosphate pyrophosphatase Tax=Tetrahymena thermophila (strain SB210) RepID=Q22LX1_TETTS
putative deoxyribonucleotide triphosphate pyrophosphatase
S_p1_S3_coassembly_k141_2117697_6
CG_Pacearch_06, Pacearchaeota, Archaea

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5704..6186
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Algoriphagus machipongonensis RepID=A3HT07_9BACT
Tax=CG_Pacearch_06
S_p1_S3_coassembly_k141_2117697_7

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comp(6276..6602)
DNA (327bp) protein (109aa)
Marine sediment metagenome DNA, contig: S01H1_L09294 {ECO:0000313|EMBL:GAF99280.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_2117697_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(6580..6858)
DNA (279bp) protein (93aa)
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_2117697_9
CG_Micra_03, Micraarchaeota, Archaea

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comp(6932..7180)
DNA (249bp) protein (83aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373945A
hypothetical protein
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_2117697_10

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comp(7177..7347)
DNA (171bp) protein (57aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60859.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_2117697_11
AR9, Woesearchaeaota, DPANN, Archaea

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7561..7749
DNA (189bp) protein (63aa)
Tax=AR9
S_p1_S3_coassembly_k141_2117697_12
AR9, Woesearchaeaota, DPANN, Archaea

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7746..7991
DNA (246bp) protein (82aa)
Tax=AR9
S_p1_S3_coassembly_k141_2117697_trna_1
unknown

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comp(8064..8147)
DNA (84bp)
transferRNA Leu
S_p1_S3_coassembly_k141_2117697_13
unknown

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comp(8525..9067)
DNA (543bp) protein (181aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_14
Parcubacteria bacterium GW2011_GWA2_47_9, Parcubacteria, Bacteria

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comp(9565..11274)
DNA (1710bp) protein (570aa)
DNA polymerase X family / putative histidinol phosphatase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP domain protein {ECO:0000313|EMBL:KKU86742.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_9.;"
hypothetical protein
S_p1_S3_coassembly_k141_2117697_15
unknown

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11415..11819
DNA (405bp) protein (135aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_16
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(11832..12497)
DNA (666bp) protein (222aa)
Helix-turn-helix, Fis-type bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
S_p1_S3_coassembly_k141_2117697_17

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comp(12572..13048)
DNA (477bp) protein (159aa)
"Winged helix" DNA-binding domain bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61749.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
MarR family transcriptional regulator
S_p1_S3_coassembly_k141_2117697_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13140..13562
DNA (423bp) protein (141aa)
Protein archease {ECO:0000256|HAMAP-Rule:MF_01222}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_2117697_19

Not on your lists

13593..15050
DNA (1458bp) protein (486aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea.;" source="archaeon GW2011_AR3.;"
protein of unknown function UPF0027
S_p1_S3_coassembly_k141_2117697_20
unknown

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15563..16258
DNA (696bp) protein (232aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_21
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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16269..16796
DNA (528bp) protein (176aa)
Putative ATP:cob(I)alamin adenosyltransferase Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZU5_MYXXD
ATP:cob(I)alamin adenosyltransferase
Putative ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABF90014.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
S_p1_S3_coassembly_k141_2117697_22
unknown

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16789..16914
DNA (126bp) protein (42aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_23
unknown

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16947..18032
DNA (1086bp) protein (362aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_24
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(18157..21096)
DNA (2940bp) protein (980aa)
B12-dependent ribonucleoside diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1)
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_2117697_25
MPI_TA06_32_111, Bacteria

Not on your lists

comp(21068..21550)
DNA (483bp) protein (161aa)
NrdR family transcriptional regulator Tax=Peptoniphilus lacrimalis RepID=UPI000375B1D2
nrdR; transcriptional regulator NrdR
Tax=MPI_TA06_32_111
S_p1_S3_coassembly_k141_2117697_26
unknown

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22050..22415
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_27
CG_Woesearch_02, Woesearchaeota, Archaea

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22441..24783
DNA (2343bp) protein (781aa)
DNA polymerase Tax=Pyrococcus RepID=DPOL_PYRFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_2117697_28
unknown

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comp(24797..25006)
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117697_29
unknown

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comp(25069..25233)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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