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S_p1_S3_coassembly_k141_441342

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_441342_1
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

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1..4131
DNA (4131bp) protein (1377aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
parallel beta-helix repeat-containing protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
psrP; cell wall surface anchored protein
S_p1_S3_coassembly_k141_441342_2
unknown

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4139..5446
DNA (1308bp) protein (436aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5488..6426
DNA (939bp) protein (313aa)
Site-determining protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTI0_METIM
cell division ATPase MinD
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_441342_4
unknown

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6426..6803
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_5
unknown

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7110..7250
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_6
unknown

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7213..7383
DNA (171bp) protein (57aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(7441..8127)
DNA (687bp) protein (229aa)
ppnK; putative inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
ATP-NAD/AcoX kinase Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9R6_9BACT bin=ACD30 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_441342_8
Parcubacteria bacterium GW2011_GWA2_47_9, Parcubacteria, Bacteria

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8165..8431
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Cyanidioschyzon merolae strain 10D RepID=M1UWJ6_CYAME
Uncharacterized protein {ECO:0000313|EMBL:KKU85979.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_9.;"
hypothetical protein
S_p1_S3_coassembly_k141_441342_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8531..8797)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Geminocystis herdmanii RepID=UPI00034AE87C
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:KCZ71856.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Plasmid stabilization system
S_p1_S3_coassembly_k141_441342_10
unknown

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comp(8794..9054)
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9051..10469)
DNA (1419bp) protein (473aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
dihydrolipoamide dehydrogenase
S_p1_S3_coassembly_k141_441342_12

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10576..11487
DNA (912bp) protein (304aa)
lipoate synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_441342_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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11509..12567
DNA (1059bp) protein (353aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Bathyarchaeota_48_13_curated
S_p1_S3_coassembly_k141_441342_14
R_RIF_OD1_07_47_27, RIF-OD1-7, Parcubacteria, Bacteria

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12567..13535
DNA (969bp) protein (323aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated
S_p1_S3_coassembly_k141_441342_15
unknown

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comp(13532..13741)
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_16
CG_Woesearch_01, Woesearchaeota, Archaea

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13888..14748
DNA (861bp) protein (287aa)
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_441342_17
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14750..15994
DNA (1245bp) protein (415aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Tax=RBG_16_Deltaproteobacteria_50_11_curated
S_p1_S3_coassembly_k141_441342_18

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comp(16000..16815)
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL88197.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Lipoate protein ligase, putative bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
lipoate protein ligase
S_p1_S3_coassembly_k141_441342_19

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comp(16822..17841)
DNA (1020bp) protein (340aa)
Lipoate-protein ligase A (EC:2.7.7.63)
Lipoate-protein ligase A, C-terminal bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60974.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_441342_20
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17863..19038)
DNA (1176bp) protein (392aa)
malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme Tax=Brevibacillus borstelensis AK1 RepID=M8DA45_9BACL
NAD-dependent malic enzyme {ECO:0000313|EMBL:EMT53124.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
S_p1_S3_coassembly_k141_441342_21
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(19086..20228)
DNA (1143bp) protein (381aa)
glutamate dehydrogenase (NADP)+ (EC:1.4.1.3)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S_p1_S3_coassembly_k141_441342_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20258..21022)
DNA (765bp) protein (255aa)
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like (EC:1.1.1.100)
3-ketoacyl-ACP reductase Tax=Geobacillus caldoxylosilyticus RepID=UPI000312BA24
Uncharacterized protein {ECO:0000313|EMBL:AIF83222.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S_p1_S3_coassembly_k141_441342_23
unknown

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comp(21049..21168)
DNA (120bp) protein (40aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441342_24
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(21169..21426)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4M9Y9_9EURY
hypothetical protein
Thioredoxin {ECO:0000313|EMBL:AKB80850.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S_p1_S3_coassembly_k141_441342_25
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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21511..21786
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
Acylphosphatase Tax=uncultured Desulfobacterium sp. RepID=E1YBR7_9DELT
acylphosphatase
S_p1_S3_coassembly_k141_441342_26

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21865..22215
DNA (351bp) protein (117aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45192.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p1_S3_coassembly_k141_441342_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(22245..22541)
DNA (297bp) protein (99aa)
DUF59 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p1_S3_coassembly_k141_441342_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(22568..24640)
DNA (2073bp) protein (691aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting P-type ATPase A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG
Tax=RBG_13_Bathyarchaeota_38_9_curated
S_p1_S3_coassembly_k141_441342_29
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(24644..24784)
DNA (141bp) protein (47aa)
Uncharacterized protein Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMS2_THELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR78719.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
S_p1_S3_coassembly_k141_441342_30
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(24774..25511)
DNA (738bp) protein (246aa)
hypothetical protein
Putative lysophospholipase bin=GW2011_AR10_complete species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Planctomycetes_43_13_curated
Displaying items 1-30 of 52 in total

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