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S_p1_S3_coassembly_k141_335586

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_335586_31
unknown

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26500..27000
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_32

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27127..28137
-----------------
DNA (1011bp)
protein (337aa)
50S ribosomal protein L3 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8W8_9EURY
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
S_p1_S3_coassembly_k141_335586_33
unknown

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28139..28399
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_34

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28400..29209
-----------------
DNA (810bp)
protein (270aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E203C
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12686.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
S_p1_S3_coassembly_k141_335586_35
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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29211..29507
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
50S ribosomal protein L23P
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_335586_36

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29507..30217
-----------------
DNA (711bp)
protein (237aa)
50S ribosomal protein L2 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT5_FERPA
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12685.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L2
S_p1_S3_coassembly_k141_335586_37

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30334..30729
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S19P Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFU9_PYRYC
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19P
S_p1_S3_coassembly_k141_335586_38

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30729..31235
-----------------
DNA (507bp)
protein (169aa)
50S ribosomal protein L22P Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFV0_PYRYC
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P
S_p1_S3_coassembly_k141_335586_39

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31333..32115
-----------------
DNA (783bp)
protein (261aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GU90_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12682.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
S_p1_S3_coassembly_k141_335586_40
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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32115..32327
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein Tax=Sulfolobales archaeon Acd1 RepID=UPI00035F09A9
50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125).;"
S_p1_S3_coassembly_k141_335586_41

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32324..32641
-----------------
DNA (318bp)
protein (106aa)
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; species="Archaea.;" source="archaeon GW2011_AR3.;"
translation initiation factor SUI1
S_p1_S3_coassembly_k141_335586_42
unknown

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32794..33108
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_43

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33116..33490
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S17P Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS17_PYRHO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
S_p1_S3_coassembly_k141_335586_44

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33487..33891
-----------------
DNA (405bp)
protein (135aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl14p; 50S ribosomal protein L14P
S_p1_S3_coassembly_k141_335586_45

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33893..34285
-----------------
DNA (393bp)
protein (131aa)
50S ribosomal protein L24P Tax=Thermococcus onnurineus (strain NA1) RepID=B6YSM5_THEON
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24
S_p1_S3_coassembly_k141_335586_46
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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34278..34988
-----------------
DNA (711bp)
protein (237aa)
30S ribosomal protein S4e Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAJ2_METCZ
rps4e; 30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
S_p1_S3_coassembly_k141_335586_47

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34990..35532
-----------------
DNA (543bp)
protein (181aa)
50S ribosomal protein L5 Tax=Methanotorris RepID=F6BD87_METIK bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12678.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
S_p1_S3_coassembly_k141_335586_48

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35634..35855
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46813.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S14
S_p1_S3_coassembly_k141_335586_49

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35855..36244
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S8 Tax=Thermofilum sp. 1910b RepID=S5ZUV4_9CREN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
S_p1_S3_coassembly_k141_335586_50

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36234..36803
-----------------
DNA (570bp)
protein (190aa)
50S ribosomal protein L6 Tax=Thermococcus zilligii RepID=UPI00029B0871
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12676.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6P
S_p1_S3_coassembly_k141_335586_51

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36805..37395
-----------------
DNA (591bp)
protein (197aa)
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO46816.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L32
S_p1_S3_coassembly_k141_335586_52

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37392..37871
-----------------
DNA (480bp)
protein (160aa)
50S ribosomal protein L19e Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TZA4_METKA
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; species="Archaea.;" source="archaeon GW2011_AR16.;"
rpl19e; 50S ribosomal protein L19
S_p1_S3_coassembly_k141_335586_53

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37871..38389
-----------------
DNA (519bp)
protein (173aa)
50S ribosomal protein L18P Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV1_FERPA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
S_p1_S3_coassembly_k141_335586_54
CG_Woesearch_01, Woesearchaeota, Archaea

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38391..39155
-----------------
DNA (765bp)
protein (255aa)
30S ribosomal protein S5 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036370A2
30S ribosomal protein S5
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_335586_55
AR20, Woesearchaeaota, DPANN, Archaea

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39157..39669
-----------------
DNA (513bp)
protein (171aa)
50S ribosomal protein L30P Tax=Pyrococcus RepID=RL30_PYRAB bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30P
Tax=AR20
S_p1_S3_coassembly_k141_335586_56

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39671..40096
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
S_p1_S3_coassembly_k141_335586_57

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40096..41493
-----------------
DNA (1398bp)
protein (466aa)
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; species="Archaea.;" source="archaeon GW2011_AR9.;"
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
S_p1_S3_coassembly_k141_335586_58

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41550..42038
-----------------
DNA (489bp)
protein (163aa)
Putative uncharacterized protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62557.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_335586_59
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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42050..42394
-----------------
DNA (345bp)
protein (115aa)
50S ribosomal protein L34e Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQC9_METIM
ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
S_p1_S3_coassembly_k141_335586_60

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42384..42719
-----------------
DNA (336bp)
protein (112aa)
50S ribosomal protein L14; K02875 large subunit ribosomal protein L14e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L14e {ECO:0000313|EMBL:KHO46826.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L14e
Displaying items 31-60 of 65 in total

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