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S_p1_S3_coassembly_k141_335586

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_335586_1

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comp(27..362)
-----------------
DNA (336bp)
protein (112aa)
erpK protein; K04798 prefoldin beta subunit bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; species="Archaea.;" source="archaeon GW2011_AR18.;"
GimC; prefoldin, chaperonin cofactor
S_p1_S3_coassembly_k141_335586_2
unknown

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comp(385..636)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_3
unknown

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728..1225
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1339..1623)
-----------------
DNA (285bp)
protein (95aa)
50S ribosomal protein L37Ae Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L37Ae
Tax=RBG_16_Euryarchaeota_68_13_curated
S_p1_S3_coassembly_k141_335586_5
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2022..3161
-----------------
DNA (1140bp)
protein (380aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|SAAS:SAAS00075163};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
Nicotinic acid phosphoribosyltransferase Tax=Desulfovibrio sp. U5L RepID=I2Q313_9DELT
quinolinate phosphoribosyl transferase
S_p1_S3_coassembly_k141_335586_6
unknown

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3158..3589
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_7

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3586..4239
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL93129.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Isochorismatase hydrolase bin=GWB2_CP_45_9 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
isochorismatase hydrolase
S_p1_S3_coassembly_k141_335586_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4236..5507
-----------------
DNA (1272bp)
protein (424aa)
NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
NH(3)-dependent NAD(+) synthetase Tax=Methanosarcina mazei Tuc01 RepID=M1P673_METMZ
S_p1_S3_coassembly_k141_335586_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5492..6061
-----------------
DNA (570bp)
protein (190aa)
Nicotinamide-nucleotide adenylyltransferase, NadM family {ECO:0000313|EMBL:EYF01114.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Nucleotidylyl transferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p1_S3_coassembly_k141_335586_10
GWB1_OD1_42_6, Parcubacteria, Bacteria

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6058..6819
-----------------
DNA (762bp)
protein (254aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase {ECO:0000313|EMBL:KKS64008.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
Serine/threonine protein kinase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p1_S3_coassembly_k141_335586_11

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6866..7816
-----------------
DNA (951bp)
protein (317aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62056.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p1_S3_coassembly_k141_335586_12

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7816..8724
-----------------
DNA (909bp)
protein (303aa)
Pyruvate/Phosphoenolpyruvate kinase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62057.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_335586_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8721..9497
-----------------
DNA (777bp)
protein (259aa)
Inosine/uridine-preferring nucleoside hydrolase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHI9_THET1
inosine/uridine-preferring nucleoside hydrolase
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_335586_14
AR10, Diapherotrites, DPANN, Archaea

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9542..10537
-----------------
DNA (996bp)
protein (332aa)
quinolinate synthase (EC:4.1.99.- 2.5.1.72)
quinolinate synthetase (EC:4.1.99.-); K03517 quinolinate synthase [EC:2.5.1.72] bin=GW2011_AR10_complete species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_335586_15
unknown

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comp(10583..11284)
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_16
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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11454..12881
-----------------
DNA (1428bp)
protein (476aa)
Malate dehydrogenase (Acceptor) Tax=Marichromatium purpuratum 984 RepID=F9TY00_MARPU
malate:quinone oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S_p1_S3_coassembly_k141_335586_17
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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12878..13759
-----------------
DNA (882bp)
protein (294aa)
NAD(+)/NADH kinase domain protein Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I9K4_9LEPT
NAD(+)/NADH kinase domain protein {ECO:0000313|EMBL:EQA55277.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
hypothetical protein
S_p1_S3_coassembly_k141_335586_18
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

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13805..14500
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZVM2_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:KKS30942.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
NUDIX hydrolase
S_p1_S3_coassembly_k141_335586_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14560..15006
-----------------
DNA (447bp)
protein (149aa)
Protein archease Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W8_METSW
Protein archease {ECO:0000256|HAMAP-Rule:MF_01222}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
S_p1_S3_coassembly_k141_335586_20
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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15168..17051
-----------------
DNA (1884bp)
protein (628aa)
hypothetical protein Tax=Streptomyces acidiscabies RepID=UPI00028890C0
Uncharacterized protein {ECO:0000313|EMBL:EFO80566.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
competence-like protein
S_p1_S3_coassembly_k141_335586_21
unknown

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17053..17640
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_22

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17642..19117
-----------------
DNA (1476bp)
protein (492aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_335586_23
unknown

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19158..19733
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_24
unknown

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19791..20291
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_25
unknown

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comp(20329..20673)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_26

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comp(20788..21264)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A9945
Uncharacterized protein {ECO:0000313|EMBL:KKN05709.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
S_p1_S3_coassembly_k141_335586_27
unknown

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21448..21696
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_28
unknown

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comp(21960..23126)
-----------------
DNA (1167bp)
protein (389aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_29
unknown

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comp(23113..24102)
-----------------
DNA (990bp)
protein (330aa)

This feature has no annotations

S_p1_S3_coassembly_k141_335586_30
unknown

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24153..26465
-----------------
DNA (2313bp)
protein (771aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

View Taxonomy