ggKbase home page

S_p1_S3_coassembly_k141_520634

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_520634_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_2
unknown

Not on your lists

comp(149..1225)
DNA (1077bp) protein (359aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_3
unknown

Not on your lists

comp(1230..1517)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1616..3265)
DNA (1650bp) protein (550aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC10
Thermosome, chaperonin Cpn60/TCP-1
Tax=AR20
S_p1_S3_coassembly_k141_520634_5

Not on your lists

comp(3545..4411)
DNA (867bp) protein (289aa)
Transposase Tax=Ferroplasma acidarmanus fer1 RepID=S0AR45_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AKA49290.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
transposase
S_p1_S3_coassembly_k141_520634_6
unknown

Not on your lists

4682..4876
DNA (195bp) protein (65aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_7
R_OP11_Gottesmanbacteria_42_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

4873..5853
DNA (981bp) protein (327aa)
ABC transporter, ATP-binding protein Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EGX3_9FIRM
natA2; ATP-binding transport protein NatA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_42_12_curated
S_p1_S3_coassembly_k141_520634_8
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5850..6644
DNA (795bp) protein (265aa)
hypothetical protein Tax=Clostridium tunisiense RepID=UPI0003608140
Uncharacterized protein {ECO:0000313|EMBL:EQB86221.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
S_p1_S3_coassembly_k141_520634_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6634..7416
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Bacillus cereus group RepID=C3EEA9_BACTU
ABC-2 transporter family protein {ECO:0000313|EMBL:KIE44364.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
S_p1_S3_coassembly_k141_520634_10
unknown

Not on your lists

comp(7462..7776)
DNA (315bp) protein (105aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_11
unknown

Not on your lists

7904..9484
DNA (1581bp) protein (527aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9468..10124
DNA (657bp) protein (219aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Putative thymidylate synthase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=TYSY_METMA
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_520634_13
unknown

Not on your lists

comp(10121..10546)
DNA (426bp) protein (142aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_14
unknown

Not on your lists

comp(10934..11143)
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11176..11514)
DNA (339bp) protein (113aa)
id=5049683 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_520634_16
unknown

Not on your lists

comp(11610..12179)
DNA (570bp) protein (190aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_17

Not on your lists


comp(12176..13435)
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Histidine--tRNA ligase Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
S_p1_S3_coassembly_k141_520634_trna_1
unknown

Not on your lists

comp(13449..13522)
DNA (74bp)
transferRNA His
S_p1_S3_coassembly_k141_520634_18

Not on your lists

comp(13859..15124)
DNA (1266bp) protein (422aa)
collagenase; K08303 putative protease [EC:3.4.-.-] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53997.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
peptidase U32
S_p1_S3_coassembly_k141_520634_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

15199..15813
DNA (615bp) protein (205aa)
Base excision DNA repair protein, HhH-GPD family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Base excision DNA repair protein, HhH-GPD family
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_520634_20
unknown

Not on your lists

15992..16915
DNA (924bp) protein (308aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

16955..17749
DNA (795bp) protein (265aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003686707
Tax=AR6
S_p1_S3_coassembly_k141_520634_22

Not on your lists

comp(17724..18779)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63084.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_520634_23

Not on your lists

comp(18846..19469)
DNA (624bp) protein (208aa)
hypothetical protein
id=5103829 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63107.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_520634_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19507..21033)
DNA (1527bp) protein (509aa)
ggdef domain protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
GAF sensor-containing diguanylate cyclase
Tax=AR18
S_p1_S3_coassembly_k141_520634_25
unknown

Not on your lists

21115..21558
DNA (444bp) protein (148aa)

This feature has no annotations

S_p1_S3_coassembly_k141_520634_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(21598..21873)
DNA (276bp) protein (92aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_520634_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

21967..22299
DNA (333bp) protein (111aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369AAB9
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_520634_28
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22392..23513)
DNA (1122bp) protein (374aa)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKS70222.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein
S_p1_S3_coassembly_k141_520634_29
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23759..24781)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382D20B
hypothetical protein
Tax=AR15
Displaying items 1-30 of 34 in total

View Taxonomy