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S_p1_S3_coassembly_k141_1081644

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1081644_1
unknown

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277..456
DNA (180bp) protein (60aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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450..905
DNA (456bp) protein (152aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_1081644_3
unknown

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970..1365
DNA (396bp) protein (132aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_4
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(1362..2519)
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
Probable tRNA sulfurtransferase Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S099_FERPA
thiamine biosynthesis/tRNA modification protein ThiI
S_p1_S3_coassembly_k141_1081644_5
AR20, Woesearchaeaota, DPANN, Archaea

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2570..3223
DNA (654bp) protein (218aa)
Ribonuclease Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease
Tax=AR20
S_p1_S3_coassembly_k141_1081644_6
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3265..3690
DNA (426bp) protein (142aa)
Peptidyl-prolyl cis-trans isomerase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
S_p1_S3_coassembly_k141_1081644_7
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3745..5073
DNA (1329bp) protein (443aa)
4-aminobutyrate aminotransferase Tax=Bacillus coagulans (strain 2-6) RepID=F7Z6H9_BACC6
4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:GAJ41500.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
S_p1_S3_coassembly_k141_1081644_8

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5070..6428
DNA (1359bp) protein (453aa)
Aldehyde dehydrogenase family protein Tax=uncultured archaeon RepID=I3RKJ3_9ARCH
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AFK24853.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
gabD; succinate-semialdehyde dehydrogenase
S_p1_S3_coassembly_k141_1081644_9
unknown

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6430..6573
DNA (144bp) protein (48aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_10

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6593..7030
DNA (438bp) protein (146aa)
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; species="Archaea.;" source="archaeon GW2011_AR11.;"
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S12
S_p1_S3_coassembly_k141_1081644_11

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7032..7628
DNA (597bp) protein (199aa)
30S ribosomal protein S7 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO52604.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
30S ribosomal protein S7
S_p1_S3_coassembly_k141_1081644_12
unknown

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7699..8076
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_13
unknown

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comp(8105..8656)
DNA (552bp) protein (184aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_14
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(8694..9302)
DNA (609bp) protein (203aa)
Ribosomal RNA adenine dimethylase Tax=Microscilla marina ATCC 23134 RepID=A1ZGD4_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S_p1_S3_coassembly_k141_1081644_15
unknown

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comp(9594..10418)
DNA (825bp) protein (275aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1081644_16
alpha proteobacterium HIMB5, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10586..11716)
DNA (1131bp) protein (377aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae.;" source="alpha proteobacterium HIMB5.;"
Diaminopimelate decarboxylase Tax=alpha proteobacterium HIMB5 RepID=J9YYB6_9PROT
diaminopimelate decarboxylase
S_p1_S3_coassembly_k141_1081644_17
CG_Pacearch_04, Pacearchaeota, Archaea

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11994..13169
DNA (1176bp) protein (392aa)
enolase (EC:4.2.1.11)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_1081644_18
AR20, Woesearchaeaota, DPANN, Archaea

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13292..13963
DNA (672bp) protein (224aa)
Conserved TM helix repeat-containing protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein
Tax=AR20
Displaying 18 items

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