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S_p1_S3_coassembly_k141_148367

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_148367_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(78..467)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_148367_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(464..1003)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein bin=GWA2_OP3_52_12 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_148367_3
unknown

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1183..1440
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

S_p1_S3_coassembly_k141_148367_4
unknown

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1507..2214
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

S_p1_S3_coassembly_k141_148367_5
unknown

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comp(2128..2937)
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

S_p1_S3_coassembly_k141_148367_6

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comp(2924..9490)
-----------------
DNA (6567bp)
protein (2189aa)
Lytic murein transglycosylase Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:AJF62368.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_148367_7
AR20, Woesearchaeaota, DPANN, Archaea

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comp(9487..11421)
-----------------
DNA (1935bp)
protein (645aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_148367_8

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comp(11418..11603)
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_148367_trna_3
unknown

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comp(11731..11803)
-----------------
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_148367_9
AR20, Woesearchaeaota, DPANN, Archaea

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11840..12457
-----------------
DNA (618bp)
protein (206aa)
Methyltransferase type 11 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0B2_DEHLB bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methyltransferase type 11
Tax=AR20
S_p1_S3_coassembly_k141_148367_10
R_OD1_57_28, Parcubacteria, Bacteria

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comp(12452..14197)
-----------------
DNA (1746bp)
protein (582aa)
ABC transporter related Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY76_PEDHD
ABC transporter
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
S_p1_S3_coassembly_k141_148367_trna_2
unknown

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comp(14264..14337)
-----------------
DNA (74bp)
transferRNA Thr
S_p1_S3_coassembly_k141_148367_11

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comp(14375..14935)
-----------------
DNA (561bp)
protein (187aa)
SSU ribosomal protein S3AE Tax=nanoarchaeote Nst1 RepID=R1E4Q5_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SSU ribosomal protein S3AE
SSU ribosomal protein S3AE {ECO:0000313|EMBL:AJF62372.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_148367_12

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comp(14972..16354)
-----------------
DNA (1383bp)
protein (461aa)
Phosphoesterase, RecJ-like protein Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
Phosphoesterase, RecJ-like protein {ECO:0000313|EMBL:AJF62373.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_148367_13

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comp(16356..16856)
-----------------
DNA (501bp)
protein (167aa)
30S ribosomal protein S15/S13e Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S15/S13e
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_148367_14
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(16902..17150)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ED1D1
Translation elongation factor-like protein
Tax=RBG_16_Zixibacteria_43_9_curated
S_p1_S3_coassembly_k141_148367_15
unknown

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17413..18108
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

S_p1_S3_coassembly_k141_148367_trna_1
unknown

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comp(18134..18219)
-----------------
DNA (86bp)
transferRNA Pseudo
S_p1_S3_coassembly_k141_148367_16

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comp(18239..19114)
-----------------
DNA (876bp)
protein (292aa)
udgA; UDP-glucose dehydrogenase (EC:1.1.1.22)
hypothetical protein Tax=Marinimicrobia RepID=UPI0003A8CC56
Uncharacterized protein {ECO:0000313|EMBL:KKL09140.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_148367_17
unknown

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comp(19126..19239)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

Displaying 20 items

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