ggKbase home page

S_p1_S3_coassembly_k141_648917

Search features with annotation key words

Displaying items 91-120 of 215 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_648917_85
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(63157..64110)
DNA (954bp) protein (318aa)
Sodium-calcium exchanger Tax=Alteromonas sp. (strain SN2) RepID=F5Z4U2_ALTSS
sodium-calcium exchanger
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S_p1_S3_coassembly_k141_648917_86
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

64226..64630
DNA (405bp) protein (135aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S_p1_S3_coassembly_k141_648917_87
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

64664..66952
DNA (2289bp) protein (763aa)
AAA family ATPase, CDC48 subfamily bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily
Tax=AR11
S_p1_S3_coassembly_k141_648917_88
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

67005..68492
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I658_METCZ
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
S_p1_S3_coassembly_k141_648917_89
GWA1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

68590..68871
DNA (282bp) protein (94aa)
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KKQ84092.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_38_8.;"
S_p1_S3_coassembly_k141_648917_90

Not on your lists

68921..70207
DNA (1287bp) protein (429aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; species="Archaea.;" source="archaeon GW2011_AR15.;"
Glutamyl-tRNA(Gln) amidotransferase subunit D bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
S_p1_S3_coassembly_k141_648917_91
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

70204..70464
DNA (261bp) protein (87aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_648917_92
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

70431..72266
DNA (1836bp) protein (612aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Glutamyl-tRNA(Gln) amidotransferase subunit E Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSC8_METIM
aspartyl-tRNA(Asn) amidotransferase, B subunit
S_p1_S3_coassembly_k141_648917_93
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(72175..73284)
DNA (1110bp) protein (370aa)
Glycosyl transferase family 2 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY86_METFV
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP77268.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p1_S3_coassembly_k141_648917_94

Not on your lists

comp(73284..74054)
DNA (771bp) protein (257aa)
alpha/beta hydrolase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Alpha/beta hydrolase {ECO:0000313|EMBL:KHO46778.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
carboxylesterase
S_p1_S3_coassembly_k141_648917_trna_9
unknown

Not on your lists

comp(74056..74130)
DNA (75bp)
transferRNA Arg
S_p1_S3_coassembly_k141_648917_95
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

74186..75133
DNA (948bp) protein (316aa)
Probable tRNA pseudouridine synthase D bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA pseudouridine synthase, TruD family
Tax=AR15
S_p1_S3_coassembly_k141_648917_96
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75114..75737)
DNA (624bp) protein (208aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
Adenylate kinase Tax=Clostridium tetani (strain Massachusetts / E88) RepID=KAD_CLOTE
S_p1_S3_coassembly_k141_648917_97

Not on your lists

comp(75734..76195)
DNA (462bp) protein (154aa)
hypothetical protein
id=5103004 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62285.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_648917_trna_6
unknown

Not on your lists

76368..76440
DNA (73bp)
transferRNA Thr
S_p1_S3_coassembly_k141_648917_98
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76444..76986
DNA (543bp) protein (181aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase Tax=Desulfospira joergensenii RepID=UPI0003B745DE
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KEQ19551.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
S_p1_S3_coassembly_k141_648917_99
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(76979..77488)
DNA (510bp) protein (170aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_648917_100
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(77489..77986)
DNA (498bp) protein (166aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_648917_101
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(77986..78594)
DNA (609bp) protein (203aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p1_S3_coassembly_k141_648917_102
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

78672..79862
DNA (1191bp) protein (397aa)
GTPase domain-containing protein; K06942 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_648917_103
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79863..81374)
DNA (1512bp) protein (504aa)
Conserved uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
diguanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
S_p1_S3_coassembly_k141_648917_104
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(81421..82539)
DNA (1119bp) protein (373aa)
hypothetical protein
DHH phosphoesterases bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_648917_105

Not on your lists

83087..84025
DNA (939bp) protein (313aa)
SpoVT/AbrB domain protein Tax=Sulfolobus RepID=C3MR72_SULIL bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_L00346 {ECO:0000313|EMBL:GAF82218.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SpoVT/AbrB protein
S_p1_S3_coassembly_k141_648917_106

Not on your lists

comp(84026..84400)
DNA (375bp) protein (125aa)
hypothetical protein; K07163 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46024.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Zn-ribbon containing protein
S_p1_S3_coassembly_k141_648917_107
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(84403..84771)
DNA (369bp) protein (123aa)
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_648917_108
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(84775..85404)
DNA (630bp) protein (210aa)
Small GTP-binding protein domain protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Small GTP-binding protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
S_p1_S3_coassembly_k141_648917_109
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(85515..85742)
DNA (228bp) protein (76aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PN20_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_648917_110
unknown

Not on your lists

comp(85870..86076)
DNA (207bp) protein (69aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_111

Not on your lists

86162..87670
DNA (1509bp) protein (503aa)
Putative ATPase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61198.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
ATPase
S_p1_S3_coassembly_k141_648917_112
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

87667..88872
DNA (1206bp) protein (402aa)
DNA double-strand break repair protein Mre11 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
Tax=AR15
Displaying items 91-120 of 215 in total

View Taxonomy