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S_p1_S3_coassembly_k141_648917

Search features with annotation key words

Displaying items 1-30 of 215 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_648917_1
unknown

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2..127
DNA (126bp) protein (42aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(128..388)
DNA (261bp) protein (87aa)
Kazal-type serine protease inhibitor domain protein (Fragment) Tax=Ichthyophthirius multifiliis (strain G5) RepID=G0QW39_ICHMG
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_648917_3
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(385..879)
DNA (495bp) protein (165aa)
hypothetical protein
Putative uncharacterized protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
S_p1_S3_coassembly_k141_648917_4
unknown

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comp(915..1190)
DNA (276bp) protein (92aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_5
unknown

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comp(1309..1635)
DNA (327bp) protein (109aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_6
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(1831..2349)
DNA (519bp) protein (173aa)
Alkyl hydroperoxide reductase bin=PER_GWC2_41_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peroxiredoxin
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S_p1_S3_coassembly_k141_648917_7

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comp(2394..2606)
DNA (213bp) protein (71aa)
30S ribosomal protein S27ae Tax=sediment metagenome RepID=D9PM36_9ZZZZ
30S ribosomal protein S27ae {ECO:0000313|EMBL:EFK95392.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rps27AE; 30S ribosomal protein S27ae
S_p1_S3_coassembly_k141_648917_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2608..2907)
DNA (300bp) protein (100aa)
30S ribosomal protein S24e Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rps24e; 30S ribosomal protein S24
S_p1_S3_coassembly_k141_648917_9
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2904..3092)
DNA (189bp) protein (63aa)
Transcription elongation factor Spt4 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase, subunit E
S_p1_S3_coassembly_k141_648917_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3089..3691)
DNA (603bp) protein (201aa)
DNA-directed RNA polymerase subunit E Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase subunit E
S_p1_S3_coassembly_k141_648917_11

Not on your lists

comp(3963..4346)
DNA (384bp) protein (128aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45206.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_648917_12

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comp(4370..5473)
DNA (1104bp) protein (368aa)
Cation/H+ exchanger Tax=sediment metagenome RepID=D9PM41_9ZZZZ
Cation/H+ exchanger {ECO:0000313|EMBL:EFK95397.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
S_p1_S3_coassembly_k141_648917_13

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5565..6785
DNA (1221bp) protein (407aa)
cca; tRNA adenylyltransferase (CCA-adding enzyme) (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01264}; species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA nucleotidyltransferase CCA-adding enzyme
S_p1_S3_coassembly_k141_648917_14

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6834..7841
DNA (1008bp) protein (336aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61492.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_648917_15

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7932..8255
DNA (324bp) protein (108aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45192.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_648917_16
unknown

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8387..8659
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_17
unknown

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8678..9145
DNA (468bp) protein (156aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9189..11594
DNA (2406bp) protein (802aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Geitlerinema sp. PCC 7407 RepID=K9S6B5_9CYAN
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_648917_19
unknown

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11596..12027
DNA (432bp) protein (144aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_20
unknown

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comp(12072..13103)
DNA (1032bp) protein (344aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_21

Not on your lists

comp(13148..14122)
DNA (975bp) protein (325aa)
Putative RNA methylase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase
S_p1_S3_coassembly_k141_648917_22
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14231..14755)
DNA (525bp) protein (175aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_648917_23
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14858..15172
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
S_p1_S3_coassembly_k141_648917_24
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15169..15603
DNA (435bp) protein (145aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Ribosomal RNA large subunit methyltransferase H Tax=Thermobrachium celere DSM 8682 RepID=R7RS70_9CLOT
ribosomal RNA large subunit methyltransferase H
S_p1_S3_coassembly_k141_648917_25
unknown

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comp(15604..16170)
DNA (567bp) protein (189aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_26
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(16230..16925)
DNA (696bp) protein (232aa)
RNA methyltransferase, TrmH family, group 1 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methyltransferase, TrmH family, group 1
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_648917_27
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(16957..18189)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003648333
Peptidase M50
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_648917_28

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comp(18551..18955)
DNA (405bp) protein (135aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation initiation factor 5A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
S_p1_S3_coassembly_k141_648917_29
unknown

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19225..19470
DNA (246bp) protein (82aa)

This feature has no annotations

S_p1_S3_coassembly_k141_648917_30

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comp(19406..20059)
DNA (654bp) protein (218aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46468.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
Displaying items 1-30 of 215 in total

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