ggKbase home page

S_p1_S3_coassembly_k141_1933904

Search features with annotation key words

Displaying items 31-60 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1933904_trna_6
unknown

Not on your lists

comp(28875..28989)
DNA (115bp)
transferRNA Thr
S_p1_S3_coassembly_k141_1933904_31
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29132..29290)
DNA (159bp) protein (53aa)
Tax=AR11
S_p1_S3_coassembly_k141_1933904_32
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

29343..31097
DNA (1755bp) protein (585aa)
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative ATPase RIL
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1933904_33
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(31112..31894)
DNA (783bp) protein (261aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36)
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1933904_34
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

31987..32331
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Mycobacterium colombiense CECT 3035 RepID=J4SGH8_9MYCO
Plastocyanin
Tax=RBG_16_Acidobacteria_64_8_curated
S_p1_S3_coassembly_k141_1933904_35
unknown

Not on your lists

32328..33029
DNA (702bp) protein (234aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_36
unknown

Not on your lists

33026..33289
DNA (264bp) protein (88aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_trna_1
unknown

Not on your lists

33334..33406
DNA (73bp)
transferRNA Cys
S_p1_S3_coassembly_k141_1933904_trna_2
unknown

Not on your lists

33537..33611
DNA (75bp)
transferRNA Arg
S_p1_S3_coassembly_k141_1933904_37

Not on your lists

comp(33612..34688)
DNA (1077bp) protein (359aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA topoisomerase (ATP-hydrolyzing) Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase ATP-hydrolyzing
S_p1_S3_coassembly_k141_1933904_38
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(34685..36316)
DNA (1632bp) protein (544aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1933904_39

Not on your lists


comp(36292..36885)
DNA (594bp) protein (198aa)
KH domain protein; K06961 ribosomal RNA assembly protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO45503.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
putative RNA-processing protein
S_p1_S3_coassembly_k141_1933904_40

Not on your lists

comp(36888..37589)
DNA (702bp) protein (234aa)
RIO kinase 1 {ECO:0000313|EMBL:KHO50185.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHO50185.1};; species="Archaea.;" source="archaeon GW2011_AR9.;"
serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
serine/threonine protein kinase
S_p1_S3_coassembly_k141_1933904_41

Not on your lists

38087..39376
DNA (1290bp) protein (430aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA primase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_1933904_42

Not on your lists

39477..40799
DNA (1323bp) protein (441aa)
Marine sediment metagenome DNA, contig: S01H1_L04350 {ECO:0000313|EMBL:GAF84016.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K06915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_1933904_43
unknown

Not on your lists

comp(40709..41230)
DNA (522bp) protein (174aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_44
unknown

Not on your lists

comp(41227..41538)
DNA (312bp) protein (104aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_45
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

41752..42204
DNA (453bp) protein (151aa)
Transcriptional regulator AsnC family Tax=Thermococcus sp. AM4 RepID=B7R3N1_9EURY
AsnC/Lrp family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1933904_46
unknown

Not on your lists

comp(42229..43602)
DNA (1374bp) protein (458aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_47
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

43867..44262
DNA (396bp) protein (132aa)
N-acetyltransferase Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK95_THEBM
N-acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:ADT83553.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
S_p1_S3_coassembly_k141_1933904_48
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(44472..45215)
DNA (744bp) protein (248aa)
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKR78656.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
transcriptional regulator TrmB bin=OD1_GWC2_34_28 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
transcriptional regulator TrmB
S_p1_S3_coassembly_k141_1933904_49
unknown

Not on your lists

45336..45812
DNA (477bp) protein (159aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_50
unknown

Not on your lists

comp(46346..46735)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_51
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(47076..47696)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B0099
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
S_p1_S3_coassembly_k141_1933904_52
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(47693..48313)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E6099
Tax=RBG_16_Archaea_50_20_curated
S_p1_S3_coassembly_k141_1933904_53
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

48556..49089
DNA (534bp) protein (178aa)
id=2048918 bin=GWD2_Clostridiales_32_59 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Tax=GWD2_Clostridiales_32_59_curated
S_p1_S3_coassembly_k141_1933904_54
unknown

Not on your lists

49105..50022
DNA (918bp) protein (306aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_55
GWC2_OP11_43_12, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(50103..50936)
DNA (834bp) protein (278aa)
Methyltransferase type 11 domain protein Tax=mine drainage metagenome RepID=T0YNX2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKS91756.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_43_12.;"
hypothetical protein
S_p1_S3_coassembly_k141_1933904_56
unknown

Not on your lists

comp(51050..51268)
DNA (219bp) protein (73aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_57
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(51304..52425)
DNA (1122bp) protein (374aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tryptophan-tRNA ligase
Tax=AR18
Displaying items 31-60 of 119 in total

View Taxonomy