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S_p1_S3_coassembly_k141_1933904

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1933904_87
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(74405..75154)
DNA (750bp) protein (250aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1933904_88

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comp(75235..76713)
DNA (1479bp) protein (493aa)
Putative hydrolase {ECO:0000313|EMBL:KHO53043.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Beta-lactamase domain protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA-metabolising metallo-beta-lactamase
S_p1_S3_coassembly_k141_1933904_trna_4
unknown

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comp(76645..76727)
DNA (83bp)
transferRNA Leu
S_p1_S3_coassembly_k141_1933904_89
unknown

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comp(76829..77302)
DNA (474bp) protein (158aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_90
unknown

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comp(77299..77574)
DNA (276bp) protein (92aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_91

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comp(77577..78314)
DNA (738bp) protein (246aa)
id=5042269 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46767.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_1933904_92

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78500..78889
DNA (390bp) protein (130aa)
id=5046299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46100.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p1_S3_coassembly_k141_1933904_93
unknown

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78889..79410
DNA (522bp) protein (174aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1933904_trna_3
unknown

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comp(79415..79503)
DNA (89bp)
transferRNA Gly
S_p1_S3_coassembly_k141_1933904_94

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comp(79538..79813)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50522.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
S_p1_S3_coassembly_k141_1933904_95
AR11, Woesearchaeaota, DPANN, Archaea

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79887..80567
DNA (681bp) protein (227aa)
TraB family protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TraB family protein
Tax=AR11
S_p1_S3_coassembly_k141_1933904_96
CG_Woesearch_02, Woesearchaeota, Archaea

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80591..81331
DNA (741bp) protein (247aa)
Peptidase M50 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1933904_97
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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81322..81654
DNA (333bp) protein (111aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1933904_98
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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81614..82222
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DX6_METBF
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1933904_99
CG_Woesearch_02, Woesearchaeota, Archaea

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82283..84493
DNA (2211bp) protein (737aa)
Hef nuclease; K10896 fanconi anemia group M protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
MUS81; Hef nuclease
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1933904_100
GWA1_OD1_59_11, Parcubacteria, Bacteria

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84517..85365
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW48039.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
transmembrane_regions 94..116 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
S_p1_S3_coassembly_k141_1933904_101
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(85410..85772)
DNA (363bp) protein (121aa)
TOPRIM domain-containing protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Toprim protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1933904_102
AR4, Woesearchaeaota, DPANN, Archaea

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85833..87155
DNA (1323bp) protein (441aa)
hypothetical protein; K00992 [EC:2.7.7.-] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S_p1_S3_coassembly_k141_1933904_103
CG_Woesearch_01, Woesearchaeota, Archaea

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87406..88347
DNA (942bp) protein (314aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L3e (L3p)
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1933904_104

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88344..89150
DNA (807bp) protein (269aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS13367.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L4
S_p1_S3_coassembly_k141_1933904_105
AR15, Woesearchaeaota, DPANN, Archaea

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89147..89395
DNA (249bp) protein (83aa)
50S ribosomal protein L23P bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L23P
Tax=AR15
S_p1_S3_coassembly_k141_1933904_106

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89397..90110
DNA (714bp) protein (238aa)
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl2p; 50S ribosomal protein L2
S_p1_S3_coassembly_k141_1933904_107

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90113..90493
DNA (381bp) protein (127aa)
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19
S_p1_S3_coassembly_k141_1933904_108

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90497..90991
DNA (495bp) protein (165aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L22P
S_p1_S3_coassembly_k141_1933904_109

Not on your lists


90988..91713
DNA (726bp) protein (242aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GQQ3_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S22596 {ECO:0000313|EMBL:GAG25521.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S3
S_p1_S3_coassembly_k141_1933904_110

Not on your lists

91945..92253
DNA (309bp) protein (103aa)
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; species="Archaea.;" source="archaeon GW2011_AR3.;"
translation initiation factor 1 (eIF-1/SUI1)
S_p1_S3_coassembly_k141_1933904_111
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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92250..92525
DNA (276bp) protein (92aa)
rpp29; ribonuclease P subunit P29 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754, ECO:0000313|EMBL:CCJ36609.1};; Rpp29 {ECO:0000256|HAMAP-Rule:MF_00754}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
Ribonuclease P protein component 1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LMX7_METBM
S_p1_S3_coassembly_k141_1933904_112

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92512..92895
DNA (384bp) protein (128aa)
30S ribosomal protein S17P Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12347.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
S_p1_S3_coassembly_k141_1933904_113

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92892..93101
DNA (210bp) protein (70aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
Displaying items 91-119 of 119 in total

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