ggKbase home page

S_p2_S4_coassembly_k141_2506219

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2506219_1

Not on your lists

comp(384..1130)
DNA (747bp) protein (249aa)
id=5048854 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53923.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
S_p2_S4_coassembly_k141_2506219_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1273..4743)
DNA (3471bp) protein (1157aa)
ATPase involved in replication control, cdc46/mcm family protein Tax=Natrinema altunense JCM 12890 RepID=L9ZF41_9EURY
DNA replication initiator Cdc21/Cdc54
Tax=RBG_16_Archaea_50_20_curated
S_p2_S4_coassembly_k141_2506219_3

Not on your lists

comp(5063..5653)
DNA (591bp) protein (197aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
S_p2_S4_coassembly_k141_2506219_4
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

5894..6991
DNA (1098bp) protein (366aa)
Probable tRNA sulfurtransferase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZP74_THELI
Putative tRNA sulfurtransferase {ECO:0000313|EMBL:KKP57065.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
thiamine biosynthesis protein ThiI
S_p2_S4_coassembly_k141_2506219_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7256..7768
DNA (513bp) protein (171aa)
Prophage antirepressor bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p2_S4_coassembly_k141_2506219_6

Not on your lists

7970..8533
DNA (564bp) protein (188aa)
rnpA; ribonuclease P protein component 3 (EC:3.1.26.5); K03539 ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO49216.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Ribonuclease P protein component 3
S_p2_S4_coassembly_k141_2506219_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8789..9412
DNA (624bp) protein (208aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_2506219_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9670..10380
DNA (711bp) protein (237aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_2506219_9
unknown

Not on your lists

comp(10544..11200)
DNA (657bp) protein (219aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_10
unknown

Not on your lists

comp(11201..11590)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_11
unknown

Not on your lists

comp(11689..12024)
DNA (336bp) protein (112aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_12
unknown

Not on your lists

12197..15943
DNA (3747bp) protein (1249aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

16185..18482
DNA (2298bp) protein (766aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p2_S4_coassembly_k141_2506219_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

18898..25818
DNA (6921bp) protein (2307aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HED4_ANADF
hypothetical protein
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_2506219_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

25956..26486
DNA (531bp) protein (177aa)
id=5046787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_2506219_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

26652..27749
DNA (1098bp) protein (366aa)
transmembrane_regions bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_2506219_17

Not on your lists

28045..28584
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50771.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
transmembrane_regions bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p2_S4_coassembly_k141_2506219_18
unknown

Not on your lists

28641..29216
DNA (576bp) protein (192aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

29324..29599
DNA (276bp) protein (92aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p2_S4_coassembly_k141_2506219_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

29776..30693
DNA (918bp) protein (306aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1J9M4_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S_p2_S4_coassembly_k141_2506219_21
unknown

Not on your lists

comp(30792..33137)
DNA (2346bp) protein (782aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_22
unknown

Not on your lists

33529..34419
DNA (891bp) protein (297aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2506219_23
unknown

Not on your lists

34517..35482
DNA (966bp) protein (322aa)

This feature has no annotations

Displaying 23 items

View Taxonomy