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S_p2_S4_coassembly_k141_1101459

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1101459_1
AR20, Woesearchaeaota, DPANN, Archaea

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comp(353..973)
DNA (621bp) protein (207aa)
Conserved hypothetical membrane protein, peptidase family M50 Tax=uncultured archaeon RepID=D1JE55_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50
Tax=AR20
S_p2_S4_coassembly_k141_1101459_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(979..1551)
DNA (573bp) protein (191aa)
hypothetical protein; K07572 putative nucleotide binding protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1101459_3
unknown

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comp(1556..2455)
DNA (900bp) protein (300aa)
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
S_p2_S4_coassembly_k141_1101459_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2510..2860)
DNA (351bp) protein (117aa)
RNA polymerase II, Rpb4 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1101459_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2862..3152)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1101459_6

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3309..3740
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51871.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K09152 hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
S_p2_S4_coassembly_k141_1101459_7

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3923..4729
DNA (807bp) protein (269aa)
DNA polymerase beta protein {ECO:0000313|EMBL:KHO52074.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA polymerase beta domain protein region (Fragment) bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA polymerase beta protein
S_p2_S4_coassembly_k141_1101459_8
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4901..8848)
DNA (3948bp) protein (1316aa)
putative hemolysin bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PKD domain-containing protein
Tax=GWA2_Gallionellales_59_43_curated
S_p2_S4_coassembly_k141_1101459_9
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(8928..9131)
DNA (204bp) protein (68aa)
id=2920181 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWD1_Spirochaetes_27_9_curated
S_p2_S4_coassembly_k141_1101459_10

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comp(9142..10131)
DNA (990bp) protein (330aa)
Signal peptide peptidase SppA, 36K type Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease IV {ECO:0000313|EMBL:KHO52428.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Signal peptide peptidase SppA, 36K type
S_p2_S4_coassembly_k141_1101459_11
AR17, Woesearchaeaota, DPANN, Archaea

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comp(10094..10288)
DNA (195bp) protein (65aa)
Tax=AR17
S_p2_S4_coassembly_k141_1101459_12

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comp(10293..10802)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52427.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
RDD bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p2_S4_coassembly_k141_1101459_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11281..11625
DNA (345bp) protein (115aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1101459_14
CG_Woesearch_02, Woesearchaeota, Archaea

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11743..12408
DNA (666bp) protein (222aa)
Nuclease (SNase domain protein) Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2U4_DESAP
nuclease
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1101459_15
unknown

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12423..12824
DNA (402bp) protein (134aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1101459_16
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12827..13270)
DNA (444bp) protein (148aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
Lipoprotein signal peptidase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2Z9_THEOJ
lipoprotein signal peptidase
S_p2_S4_coassembly_k141_1101459_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(13304..13711)
DNA (408bp) protein (136aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1101459_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(13949..14746)
DNA (798bp) protein (266aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl11p; 50S ribosomal protein L11
Tax=AR11
S_p2_S4_coassembly_k141_1101459_19

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comp(14904..15407)
DNA (504bp) protein (168aa)
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea.;" source="archaeon GW2011_AR11.;"
NusG antitermination factor bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
Displaying 19 items

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