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S_p2_S4_coassembly_k141_2467818

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2467818_1

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3..653
DNA (651bp) protein (217aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Archaea.;" source="archaeon GW2011_AR15.;"
Probable lipoyl synthase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
lipoate synthase
S_p2_S4_coassembly_k141_2467818_2
unknown

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comp(646..1278)
DNA (633bp) protein (211aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467818_3
AR15, Woesearchaeaota, DPANN, Archaea

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1429..2493
DNA (1065bp) protein (355aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p2_S4_coassembly_k141_2467818_4
unknown

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2516..3037
DNA (522bp) protein (174aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467818_5

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3031..4005
DNA (975bp) protein (325aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:KHO45396.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KHO45396.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
transketolase, central region
S_p2_S4_coassembly_k141_2467818_6
unknown

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4196..4522
DNA (327bp) protein (109aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467818_7

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4566..5882
DNA (1317bp) protein (439aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO45395.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p2_S4_coassembly_k141_2467818_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(5884..6639)
DNA (756bp) protein (252aa)
lipoate-protein ligase A, C-terminal fragment; K03800 lipoate-protein ligase A [EC:2.7.7.63] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative biotin/lipoate A/B protein ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
S_p2_S4_coassembly_k141_2467818_9

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comp(7012..8004)
DNA (993bp) protein (331aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XL1_METBU
Uncharacterized protein {ECO:0000313|EMBL:KHO53017.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hydrolase
S_p2_S4_coassembly_k141_2467818_10

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comp(8001..9164)
DNA (1164bp) protein (388aa)
Methylase {ECO:0000313|EMBL:KHO53018.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Methylase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
S_p2_S4_coassembly_k141_2467818_11
unknown

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comp(9386..9532)
DNA (147bp) protein (49aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467818_12
R_SM2F11_50_11, SM2F11, Bacteria

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comp(9735..10265)
DNA (531bp) protein (177aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
YHS domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
S_p2_S4_coassembly_k141_2467818_13
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10298..10489)
DNA (192bp) protein (64aa)
YcfA family protein Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein {ECO:0000313|EMBL:EHQ36250.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
YcfA family protein
S_p2_S4_coassembly_k141_2467818_14
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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comp(10490..10696)
DNA (207bp) protein (69aa)
Uncharacterized protein family UPF0150 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKU47138.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
hypothetical protein
S_p2_S4_coassembly_k141_2467818_15
R_OD1_Nomurabacteria_42_16, Nomurabacteria, Parcubacteria, Bacteria

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comp(10766..11203)
DNA (438bp) protein (146aa)
Raf kinase inhibitor-like protein, YbhB/YbcL family
Phospholipid-binding protein, PBP family bin=GWB2_Pelobacter_53_15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_42_16_curated
Displaying 15 items

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