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S_p2_S4_coassembly_k141_4077500

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_4077500_trna_1
unknown

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comp(7..105)
DNA (99bp)
transferRNA Leu
S_p2_S4_coassembly_k141_4077500_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(122..919)
DNA (798bp) protein (266aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_4077500_2
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(920..1318)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_4077500_3

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comp(1308..1841)
DNA (534bp) protein (178aa)
30S ribosomal protein S4 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS4_THEKO
Marine sediment metagenome DNA, contig: S01H1_L06460 {ECO:0000313|EMBL:GAF76524.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps4p; 30S ribosomal protein S4
S_p2_S4_coassembly_k141_4077500_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1867..2355)
DNA (489bp) protein (163aa)
30S ribosomal protein S13P bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps13p; 30S ribosomal protein S13p
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_4077500_5
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

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2866..3261
DNA (396bp) protein (132aa)
Peptide methionine sulfoxide reductase MsrB Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN71_METZD
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
S_p2_S4_coassembly_k141_4077500_6
AR4, Woesearchaeaota, DPANN, Archaea

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comp(3354..3869)
DNA (516bp) protein (172aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p2_S4_coassembly_k141_4077500_7
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3888..4358)
DNA (471bp) protein (157aa)
hypothetical protein
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_4077500_8

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comp(4368..4709)
DNA (342bp) protein (114aa)
Nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Nascent polypeptide associated complex NAC
S_p2_S4_coassembly_k141_4077500_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(4714..4869)
DNA (156bp) protein (52aa)
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S_p2_S4_coassembly_k141_4077500_10
unknown

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comp(5326..5601)
DNA (276bp) protein (92aa)

This feature has no annotations

S_p2_S4_coassembly_k141_4077500_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5632..6756)
DNA (1125bp) protein (375aa)
rRNA (Guanine-N(2)-)-methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
N6-adenine-specific DNA methylase
Tax=CG_Woesearch_02
Displaying 12 items

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