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S_p2_S4_coassembly_k141_4036980

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_4036980_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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86..1291
DNA (1206bp) protein (402aa)
ORC1-type DNA replication protein Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF40_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ORC1-type DNA replication protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_4036980_2
CG_Woesearch_02, Woesearchaeota, Archaea

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1293..2798
DNA (1506bp) protein (502aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_4036980_3
CG_Woesearch_02, Woesearchaeota, Archaea

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2800..6300
DNA (3501bp) protein (1167aa)
DNA polymerase II large subunit Tax=nanoarchaeote Nst1 RepID=R1E5T5_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase II large subunit
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_4036980_4
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6376..7590)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0E3_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62165.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
S_p2_S4_coassembly_k141_4036980_5

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comp(7655..8068)
DNA (414bp) protein (138aa)
translation initiation factor IF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit 2 {ECO:0000313|EMBL:KHO47251.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Translation initiation factor 2 subunit beta
S_p2_S4_coassembly_k141_4036980_6

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8155..9006
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49210.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Uncharacterized membrane protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p2_S4_coassembly_k141_4036980_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8998..9609)
DNA (612bp) protein (204aa)
id=5048854 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_4036980_8

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comp(9614..11635)
DNA (2022bp) protein (674aa)
mcm; DNA replication initiator protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA replication initiator protein, replicative DNA helicase Mcm {ECO:0000313|EMBL:KHO46116.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46116.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA replication initiator Cdc21/Cdc54
S_p2_S4_coassembly_k141_4036980_9

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comp(11703..11918)
DNA (216bp) protein (72aa)
Marine sediment metagenome DNA, contig: S01H1_S21131 {ECO:0000313|EMBL:GAG23819.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TATA-box-binding protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
TATA-box-binding protein
S_p2_S4_coassembly_k141_4036980_10

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comp(11958..12224)
DNA (267bp) protein (89aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
Displaying 10 items

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