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S_p2_S4_coassembly_k141_562222

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_562222_trna_2
unknown

Not on your lists

comp(10..82)
DNA (73bp)
transferRNA His
S_p2_S4_coassembly_k141_562222_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(120..596)
DNA (477bp) protein (159aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p2_S4_coassembly_k141_562222_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(589..1272)
DNA (684bp) protein (228aa)
Cell division ATPase MinD, archaeal bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
cell division ATPase MinD
Tax=AR5
S_p2_S4_coassembly_k141_562222_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1269..1718)
DNA (450bp) protein (150aa)
hypothetical protein
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_562222_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1783..2256)
DNA (474bp) protein (158aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003645100
hypothetical protein
Tax=AR9
S_p2_S4_coassembly_k141_562222_5
unknown

Not on your lists

comp(2315..2647)
DNA (333bp) protein (111aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2716..3030)
DNA (315bp) protein (105aa)
Nascent polypeptide-associated complex protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
alpha-NAC related protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_562222_7

Not on your lists

comp(3067..3243)
DNA (177bp) protein (59aa)
Preprotein translocase Sec, Sec61-beta subunit bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61290.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p2_S4_coassembly_k141_562222_8

Not on your lists

3649..7332
DNA (3684bp) protein (1228aa)
psp3; putative alkaline protease bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48415.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
S_p2_S4_coassembly_k141_562222_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7489..8598)
DNA (1110bp) protein (370aa)
rRNA (Guanine-N(2)-)-methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rRNA (guanine-N(2)-)-methyltransferase
Tax=AR15
S_p2_S4_coassembly_k141_562222_10
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8588..12433)
DNA (3846bp) protein (1282aa)
DNA gyrase subunit A bin=GWC2_OP3_44_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
DNA gyrase subunit A
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
S_p2_S4_coassembly_k141_562222_11

Not on your lists

12589..13119
DNA (531bp) protein (177aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53361.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
S_p2_S4_coassembly_k141_562222_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

13116..13544
DNA (429bp) protein (143aa)
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p2_S4_coassembly_k141_562222_13
unknown

Not on your lists

comp(13541..13678)
DNA (138bp) protein (46aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13678..14652)
DNA (975bp) protein (325aa)
condensin subunit ScpB; K06024 segregation and condensation protein B bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
Tax=AR11
S_p2_S4_coassembly_k141_562222_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14630..15223)
DNA (594bp) protein (198aa)
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_562222_16
unknown

Not on your lists

15353..15820
DNA (468bp) protein (156aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037102DF
S_p2_S4_coassembly_k141_562222_17
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

15817..16041
DNA (225bp) protein (75aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_562222_18

Not on your lists

16038..16427
DNA (390bp) protein (130aa)
Marine sediment metagenome DNA, contig: S01H1_S08208 {ECO:0000313|EMBL:GAG06249.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S_p2_S4_coassembly_k141_562222_trna_1
unknown

Not on your lists

16491..16625
DNA (135bp)
transferRNA Leu
S_p2_S4_coassembly_k141_562222_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16670..17668)
DNA (999bp) protein (333aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_562222_20
unknown

Not on your lists

17815..19209
DNA (1395bp) protein (465aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_21

Not on your lists

19522..20856
DNA (1335bp) protein (445aa)
Putative hydrolase {ECO:0000313|EMBL:KHO53043.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Beta-lactamase domain protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA-metabolising metallo-beta-lactamase
S_p2_S4_coassembly_k141_562222_22
unknown

Not on your lists

comp(20873..23122)
DNA (2250bp) protein (750aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_23
unknown

Not on your lists

comp(23147..23896)
DNA (750bp) protein (250aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_24

Not on your lists

24172..24915
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA polymerase sliding clamp
S_p2_S4_coassembly_k141_562222_25
unknown

Not on your lists

24908..25060
DNA (153bp) protein (51aa)

This feature has no annotations

S_p2_S4_coassembly_k141_562222_26
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(25044..26288)
DNA (1245bp) protein (415aa)
Natural resistance-associated macrophage protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Mn2+/Fe2_ transporter, NRAMP family
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_562222_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(26275..27555)
DNA (1281bp) protein (427aa)
Predicted cation transporter Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Z6_UNCMA
cation transporter
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_562222_28
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27597..28469)
DNA (873bp) protein (291aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
Diaminopimelate epimerase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E856_METEZ
Displaying items 1-30 of 33 in total

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