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S_p2_S4_coassembly_k141_2467878

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2467878_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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229..1143
DNA (915bp) protein (305aa)
Dienelactone hydrolase-like enzyme Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYB6_METHD
dienelactone hydrolase-like enzyme
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p2_S4_coassembly_k141_2467878_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

1170..2657
DNA (1488bp) protein (496aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative thymidine phosphorylase
Tax=AR4
S_p2_S4_coassembly_k141_2467878_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(2924..3862)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Haloferax larsenii JCM 13917 RepID=M0H0K6_9EURY
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p2_S4_coassembly_k141_2467878_5

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4008..4733
DNA (726bp) protein (242aa)
id=5042269 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46767.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p2_S4_coassembly_k141_2467878_6
AR11, Woesearchaeaota, DPANN, Archaea

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4735..5094
DNA (360bp) protein (120aa)
Tax=AR11
S_p2_S4_coassembly_k141_2467878_7
unknown

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5136..5456
DNA (321bp) protein (107aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_8
unknown

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5717..6280
DNA (564bp) protein (188aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_9
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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6273..6875
DNA (603bp) protein (201aa)
DNA polymerase, beta domain protein region Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1W6_DESRM
DNA polymerase subunit beta
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
S_p2_S4_coassembly_k141_2467878_trna_3
unknown

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comp(6929..7012)
DNA (84bp)
transferRNA Ser
S_p2_S4_coassembly_k141_2467878_10

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comp(7020..7853)
DNA (834bp) protein (278aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53259.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
phage antirepressor protein
S_p2_S4_coassembly_k141_2467878_11
unknown

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comp(7915..8634)
DNA (720bp) protein (240aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_12
unknown

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comp(8682..10406)
DNA (1725bp) protein (575aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_trna_2
unknown

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comp(10463..10614)
DNA (152bp)
transferRNA Glu
S_p2_S4_coassembly_k141_2467878_13
unknown

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comp(10651..10809)
DNA (159bp) protein (53aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_14

Not on your lists

10895..11068
DNA (174bp) protein (58aa)
Marine sediment metagenome DNA, contig: S01H1_S27677 {ECO:0000313|EMBL:GAG41677.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5044612 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p2_S4_coassembly_k141_2467878_15
MPI_TA06_32_111, Bacteria

Not on your lists

11077..11658
DNA (582bp) protein (194aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWT8_HALOH
Tax=MPI_TA06_32_111
S_p2_S4_coassembly_k141_2467878_16
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11641..12561)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Brevibacillus brevis RepID=UPI000360C0F2
Uncharacterized protein {ECO:0000313|EMBL:KKR78593.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
phosphotransferase
S_p2_S4_coassembly_k141_2467878_17
unknown

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comp(12617..12817)
DNA (201bp) protein (67aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_18

Not on your lists

12900..13970
DNA (1071bp) protein (357aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:KHO50883.1}; EC=3.5.4.26 {ECO:0000313|EMBL:KHO50883.1};; species="Archaea.;" source="archaeon GW2011_AR11.;"
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
S_p2_S4_coassembly_k141_2467878_19

Not on your lists

13967..14566
DNA (600bp) protein (200aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
UPI0003D5B3FD related cluster Tax=unknown RepID=UPI0003D5B3FD
Marine sediment metagenome DNA, contig: S01H4_S02445 {ECO:0000313|EMBL:GAG79343.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p2_S4_coassembly_k141_2467878_20

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14593..15237
DNA (645bp) protein (215aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
Marine sediment metagenome DNA, contig: S03H2_S01253 {ECO:0000313|EMBL:GAH61656.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p2_S4_coassembly_k141_2467878_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


15234..16895
DNA (1662bp) protein (554aa)
Arginine--tRNA ligase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S_p2_S4_coassembly_k141_2467878_22

Not on your lists

comp(16896..18116)
DNA (1221bp) protein (407aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=uncultured bacterium RepID=K2E044_9BACT
S_p2_S4_coassembly_k141_2467878_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18161..19462
DNA (1302bp) protein (434aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_2467878_24

Not on your lists


19511..19708
DNA (198bp) protein (66aa)
30S ribosomal protein S17 Tax=Thermococcus zilligii RepID=UPI00029A644A
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; species="Archaea.;" source="archaeon GW2011_AR16.;"
rps17E; 30S ribosomal protein S17e
S_p2_S4_coassembly_k141_2467878_25

Not on your lists

19712..19993
DNA (282bp) protein (94aa)
Marine sediment metagenome DNA, contig: S01H1_S07743 {ECO:0000313|EMBL:GAG01145.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA-binding protein Alba
S_p2_S4_coassembly_k141_2467878_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

20113..20253
DNA (141bp) protein (47aa)
Tax=CG_Aenigma_01
S_p2_S4_coassembly_k141_2467878_27
unknown

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20243..20827
DNA (585bp) protein (195aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2467878_28

Not on your lists

20961..21881
DNA (921bp) protein (307aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcription initiation factor IIB
Displaying items 1-30 of 87 in total

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