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S34_3B_scaffold_23358

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S34_3B_scaffold_23358_1

Not on your lists

comp(177..365)
DNA (189bp) protein (63aa)
Putative DNA methylase id=3950290 bin=GWA2_CPR4_42_17 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Uncharacterized protein {ECO:0000313|EMBL:KKS37365.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
type IV restriction endonuclease
S34_3B_scaffold_23358_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..1055
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITP9_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99350.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
S34_3B_scaffold_23358_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1125..2369)
DNA (1245bp) protein (415aa)
Transposase, IS4 family protein/SWIM domain fusion id=5043716 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transposase, IS4 family protein/SWIM domain fusion
Tax=AR4
S34_3B_scaffold_23358_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2489..2656
DNA (168bp) protein (56aa)
id=5048487 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Pacearchaeota_36_9_curated
S34_3B_scaffold_23358_5
unknown

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comp(2673..2783)
DNA (111bp) protein (37aa)

This feature has no annotations

S34_3B_scaffold_23358_6
unknown

Not on your lists

comp(2896..3309)
DNA (414bp) protein (138aa)

This feature has no annotations

S34_3B_scaffold_23358_7
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

3503..3925
DNA (423bp) protein (141aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
S34_3B_scaffold_23358_8
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

3901..4470
DNA (570bp) protein (190aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TA14_METSL
CDP-alcohol phosphatidyltransferase
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
S34_3B_scaffold_23358_9
RHI_Saccharibacteria_47_17, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4590..5138)
DNA (549bp) protein (183aa)
hypothetical protein id=5091473 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_17_curated
S34_3B_scaffold_23358_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(5193..10622)
DNA (5430bp) protein (1810aa)
Uncharacterized protein n=1 Tax=Eimeria mitis RepID=U6KJH8_9EIME
hypothetical protein
Tax=CG_Woesearch_01
S34_3B_scaffold_23358_11
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10588..11280)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S2W3_DESTD
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
S34_3B_scaffold_23358_12
unknown

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11438..12124
DNA (687bp) protein (229aa)

This feature has no annotations

S34_3B_scaffold_23358_13

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comp(12131..12574)
DNA (444bp) protein (148aa)
Transcription regulator, Lrp/AsnC family id=5050205 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:KHO44986.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AsnC family transcriptional regulator
S34_3B_scaffold_23358_14
bacterium UASB270, Bacteria

Not on your lists

12812..14158
DNA (1347bp) protein (449aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
glnA; glutamine synthetase, type I (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] id=5041736 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glnA; glutamine synthetase, type I (EC:6.3.1.2)
S34_3B_scaffold_23358_15
unknown

Not on your lists

comp(14272..14484)
DNA (213bp) protein (71aa)

This feature has no annotations

S34_3B_scaffold_23358_16
unknown

Not on your lists

14487..16727
DNA (2241bp) protein (747aa)

This feature has no annotations

S34_3B_scaffold_23358_17

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16814..20305
DNA (3492bp) protein (1164aa)
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
S34_3B_scaffold_23358_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(20368..21444)
DNA (1077bp) protein (359aa)
Type II secretion system protein F GspF2 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA00_9EURY id=5102969 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Type II secretion system protein F GspF2
Tax=CG_Woesearch_01
S34_3B_scaffold_23358_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21455..22282)
DNA (828bp) protein (276aa)
Type II secretion system protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG92_9EURY id=5102968 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Type II secretion system protein
Tax=AR11
S34_3B_scaffold_23358_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(22279..23895)
DNA (1617bp) protein (539aa)
Secretory protein kinase n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AD08_9EURY id=5102967 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Secretory protein kinase
Tax=CG_Woesearch_01
S34_3B_scaffold_23358_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(23977..25131)
DNA (1155bp) protein (385aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN31_TRIVA
hypothetical protein
Tax=CG_Woesearch_01
S34_3B_scaffold_23358_22

Not on your lists

comp(25255..26223)
DNA (969bp) protein (323aa)
id=5046901 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45847.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S34_3B_scaffold_23358_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(26262..29705)
DNA (3444bp) protein (1148aa)
id=5046900 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_01
S34_3B_scaffold_23358_24
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(29753..31279)
DNA (1527bp) protein (509aa)
Tax=CG_Pacearch_03
S34_3B_scaffold_23358_25

Not on your lists

comp(31325..31762)
DNA (438bp) protein (146aa)
id=5046898 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45844.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S34_3B_scaffold_23358_26

Not on your lists

comp(31710..32120)
DNA (411bp) protein (137aa)
Putative uncharacterized protein id=5046897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45843.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S34_3B_scaffold_23358_27
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(32153..32758)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Claviceps purpurea (strain 20.1) RepID=M1W1C3_CLAP2
Putative uncharacterized protein {ECO:0000313|EMBL:EAY04059.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
S34_3B_scaffold_23358_28
unknown

Not on your lists

comp(32841..33794)
DNA (954bp) protein (318aa)

This feature has no annotations

S34_3B_scaffold_23358_29
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33902..34510
DNA (609bp) protein (203aa)
hypothetical protein id=14425722 bin=bin1_lowGC species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
metal dependent hydrolase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S34_3B_scaffold_23358_30
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

34645..35400
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZV41_9BACT
hypothetical protein
Tax=CG_PER_02
Displaying items 1-30 of 46 in total

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