ggKbase home page

S35_SO-1_scaffold_116050

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_116050_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
Transposase n=2 Tax=Ferroplasma sp. Type II RepID=T0M1Q8_9EURY
transposase
Tax=CG_Aenigma_01
S35_SO-1_scaffold_116050_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

476..2068
DNA (1593bp) protein (531aa)
Ig family protein id=5046016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S35_SO-1_scaffold_116050_3
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


2283..3974
DNA (1692bp) protein (564aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK94_9FIRM
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
S35_SO-1_scaffold_116050_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4053..4523
DNA (471bp) protein (157aa)
Tax=AR9
S35_SO-1_scaffold_116050_5

Not on your lists


4696..5211
DNA (516bp) protein (172aa)
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Large subunit ribosomal protein L10e {ECO:0000313|EMBL:KHO46354.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rpl10e; 50S ribosomal protein L10
S35_SO-1_scaffold_116050_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5575..7698)
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9YBX8_ALTMA id=5103833 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S35_SO-1_scaffold_116050_7

Not on your lists

comp(7698..10982)
DNA (3285bp) protein (1095aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9F9L7_9SPIT
Periplasmic copper-binding protein {ECO:0000313|EMBL:AIF01511.1}; TaxID=1457885 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_149_F06.;"
hypothetical protein
S35_SO-1_scaffold_116050_8

Not on your lists

comp(10979..11254)
DNA (276bp) protein (92aa)
Transcriptional regulatory protein, ArsR family n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28998_ARCFU
Marine sediment metagenome DNA, contig: S01H1_S37646 {ECO:0000313|EMBL:GAG53245.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulatory protein, ArsR family
S35_SO-1_scaffold_116050_9
unknown

Not on your lists

11500..11766
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 9 items

View Taxonomy