ggKbase home page

S35_SO-1_scaffold_633098

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_633098_1
unknown

Not on your lists

3..122
DNA (120bp) protein (40aa)

This feature has no annotations

S35_SO-1_scaffold_633098_2
unknown

Not on your lists

comp(378..551)
DNA (174bp) protein (58aa)

This feature has no annotations

S35_SO-1_scaffold_633098_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(567..767)
DNA (201bp) protein (67aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_633098_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(867..2048)
DNA (1182bp) protein (394aa)
NEQ186 id=5800112 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proteasome-activating nucleotidase
Tax=AR9
S35_SO-1_scaffold_633098_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2098..4068)
DNA (1971bp) protein (657aa)
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein
Tax=AR9
S35_SO-1_scaffold_633098_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4159..4773
DNA (615bp) protein (205aa)
thiamine biosynthesis protein ThiI
thiamine biosynthesis/tRNA modification protein ThiI; K03151 thiamine biosynthesis protein ThiI id=5241324 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR9
S35_SO-1_scaffold_633098_7
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

4775..6151
DNA (1377bp) protein (459aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=5094076 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Cysteinyl-tRNA synthetase, cysteinyl-tRNA synthetase {ECO:0000313|EMBL:KKP40190.1}; EC=6.1.1.16 {ECO:0000313|EMBL:KKP40190.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
S35_SO-1_scaffold_633098_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

6210..7166
DNA (957bp) protein (319aa)
redoxin domain-containing protein id=14428213 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
redoxin domain-containing protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S35_SO-1_scaffold_633098_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7214..9553)
DNA (2340bp) protein (780aa)
PGAP1 family protein id=5799748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PGAP1-like protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_633098_10
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9594..9857)
DNA (264bp) protein (88aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSR8_CLOCD
Glutaredoxin-like protein, YruB-family
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
S35_SO-1_scaffold_633098_11
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

10067..10990
DNA (924bp) protein (308aa)
Transketolase protein n=1 Tax=uncultured bacterium RepID=K2BZM8_9BACT
Transketolase protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
S35_SO-1_scaffold_633098_12
R_OP11_Daviesbacteria_44_29, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10992..11984
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0H0_9BACT
Transketolase, central region
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_44_29_curated
S35_SO-1_scaffold_633098_13

Not on your lists

12079..13008
DNA (930bp) protein (310aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5047114 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO45563.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO45563.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
thioredoxin reductase (EC:1.8.1.9)
S35_SO-1_scaffold_633098_14
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

13042..15549
DNA (2508bp) protein (836aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG43_9EURY
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:EET90513.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Peptidase M1 membrane alanine aminopeptidase
S35_SO-1_scaffold_633098_15
unknown

Not on your lists

15724..15873
DNA (150bp) protein (50aa)

This feature has no annotations

S35_SO-1_scaffold_633098_16
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15833..16474)
DNA (642bp) protein (214aa)
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KJR40901.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJR40901.1};; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00031DADB6
S35_SO-1_scaffold_633098_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16521..17114)
DNA (594bp) protein (198aa)
Nitroreductase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GJE8_METPE
nitroreductase
Tax=AR11
S35_SO-1_scaffold_633098_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17218..17379)
DNA (162bp) protein (54aa)
hypothetical protein id=120310 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=AR9
S35_SO-1_scaffold_633098_19
unknown

Not on your lists

comp(17624..18226)
DNA (603bp) protein (201aa)

This feature has no annotations

S35_SO-1_scaffold_633098_20

Not on your lists


comp(18228..20651)
DNA (2424bp) protein (808aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Valine-tRNA ligase
S35_SO-1_scaffold_633098_21
unknown

Not on your lists

20745..21080
DNA (336bp) protein (112aa)

This feature has no annotations

S35_SO-1_scaffold_633098_22

Not on your lists

comp(21084..22511)
DNA (1428bp) protein (476aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
S35_SO-1_scaffold_633098_23
unknown

Not on your lists

22851..23060
DNA (210bp) protein (70aa)

This feature has no annotations

S35_SO-1_scaffold_633098_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

23184..24386
DNA (1203bp) protein (401aa)
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit
Tax=AR9
S35_SO-1_scaffold_633098_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

24439..25452
DNA (1014bp) protein (338aa)
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM domain-containing protein
Tax=AR9
S35_SO-1_scaffold_633098_26
unknown

Not on your lists

comp(25477..25968)
DNA (492bp) protein (164aa)

This feature has no annotations

S35_SO-1_scaffold_633098_27
unknown

Not on your lists

comp(26135..26260)
DNA (126bp) protein (42aa)

This feature has no annotations

S35_SO-1_scaffold_633098_28
unknown

Not on your lists

comp(26481..27554)
DNA (1074bp) protein (358aa)

This feature has no annotations

S35_SO-1_scaffold_633098_29
unknown

Not on your lists

comp(27557..27898)
DNA (342bp) protein (114aa)

This feature has no annotations

S35_SO-1_scaffold_633098_30
unknown

Not on your lists

comp(27938..28744)
DNA (807bp) protein (269aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

View Taxonomy