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S35_SO-1_scaffold_352044

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_352044_1
unknown

Not on your lists

comp(1..966)
DNA (966bp) protein (322aa)

This feature has no annotations

S35_SO-1_scaffold_352044_2
unknown

Not on your lists

comp(990..1469)
DNA (480bp) protein (160aa)

This feature has no annotations

S35_SO-1_scaffold_352044_3
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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1581..2567
DNA (987bp) protein (329aa)
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KKQ17639.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5044008 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
S35_SO-1_scaffold_352044_4

Not on your lists

2610..2984
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53623.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5047440 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S35_SO-1_scaffold_352044_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2986..3339
DNA (354bp) protein (118aa)
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_352044_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

3732..4313
DNA (582bp) protein (194aa)
hypothetical protein id=5048335 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S35_SO-1_scaffold_352044_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4306..5073
DNA (768bp) protein (256aa)
hypothetical protein id=5048336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S35_SO-1_scaffold_352044_8

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comp(5245..6450)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003718CE3
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96334.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ATPase AAA
S35_SO-1_scaffold_352044_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6587..7264
DNA (678bp) protein (226aa)
Uncharacterized protein id=5800565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
uridylate kinase
Tax=CG_Woesearch_02
S35_SO-1_scaffold_352044_10
unknown

Not on your lists

7270..7518
DNA (249bp) protein (83aa)

This feature has no annotations

S35_SO-1_scaffold_352044_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7529..8035)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BD51F
Tax=AR11
S35_SO-1_scaffold_352044_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8039..9763)
DNA (1725bp) protein (575aa)
ABC-1 domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVJ5_ACEAZ
ABC transporter
Tax=AR11
S35_SO-1_scaffold_352044_13
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(9723..10025)
DNA (303bp) protein (101aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=16545 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
CutA1 divalent ion tolerance protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S35_SO-1_scaffold_352044_14
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


10118..11059
DNA (942bp) protein (314aa)
Nop58p-like protein pre mRNA splicing protein {ECO:0000313|EMBL:KKR78011.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_352044_15
unknown

Not on your lists

11056..11151
DNA (96bp) protein (32aa)

This feature has no annotations

S35_SO-1_scaffold_352044_16
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


11135..11818
DNA (684bp) protein (228aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase id=5799901 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibrillarin
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S35_SO-1_scaffold_352044_17

Not on your lists

11835..12491
DNA (657bp) protein (219aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=THIE_METMA
Marine sediment metagenome DNA, contig: S12H4_C01944 {ECO:0000313|EMBL:GAI65690.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_352044_18
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

12517..13263
DNA (747bp) protein (249aa)
hypothetical protein
transmembrane_regions id=5240957 bin=GW2011_AR10_complete species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_19FT_COMBO_OP11_43_10_curated
S35_SO-1_scaffold_352044_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13265..13972
DNA (708bp) protein (236aa)
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein id=5240958 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR11
S35_SO-1_scaffold_352044_20

Not on your lists

13985..14302
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51599.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
ATP-cone id=5240959 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S35_SO-1_scaffold_352044_21
unknown

Not on your lists

14324..14425
DNA (102bp) protein (34aa)

This feature has no annotations

S35_SO-1_scaffold_352044_22

Not on your lists

14448..15254
DNA (807bp) protein (269aa)
hypothetical protein id=5042274 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46772.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
Displaying 22 items

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