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S35_SO-1_scaffold_66325

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_66325_1

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2..493
DNA (492bp) protein (164aa)
Marine sediment metagenome DNA, contig: S01H1_L09436 {ECO:0000313|EMBL:GAF88010.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mRNA surveillance protein Pelota
S35_SO-1_scaffold_66325_2
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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679..2625
DNA (1947bp) protein (649aa)
acsA; acetate--CoA ligase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase id=1821336 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
S35_SO-1_scaffold_66325_3

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2801..3619
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53829.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_66325_4
unknown

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3661..4275
DNA (615bp) protein (205aa)

This feature has no annotations

S35_SO-1_scaffold_66325_5
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4337..4588
DNA (252bp) protein (84aa)
Chorismate mutase {ECO:0000313|EMBL:EGY76331.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EGY76331.1};; Flags: Fragment;; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
Chorismate mutase (Fragment) n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D6Y8_9FIRM
chorismate mutase
S35_SO-1_scaffold_66325_6
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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4590..5435
DNA (846bp) protein (282aa)
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AJI1_METOI
Tax=GWA2_WOR_2_47_8_curated
S35_SO-1_scaffold_66325_7

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5437..6375
DNA (939bp) protein (313aa)
Transketolase {ECO:0000313|EMBL:KHO49455.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KHO49455.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transketolase subunit B (EC:2.2.1.1)
Transketolase, central region n=2 Tax=Thermoanaerobacter RepID=B0KD60_THEP3
S35_SO-1_scaffold_66325_8

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6502..7152
DNA (651bp) protein (217aa)
translaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=5042333 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transaldolase (EC:2.2.1.2)
S35_SO-1_scaffold_66325_9
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

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comp(7220..7762)
DNA (543bp) protein (181aa)
id=5045890 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_48_16_curated
S35_SO-1_scaffold_66325_10
unknown

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8027..8299
DNA (273bp) protein (91aa)

This feature has no annotations

S35_SO-1_scaffold_66325_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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8410..9558
DNA (1149bp) protein (383aa)
GTPase; K06944 id=5044068 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
GTP-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_66325_12
CG_Omnitr_04, Omnitrophica, Bacteria

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9845..10858
DNA (1014bp) protein (338aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CML5_DESK7
Tax=CG_Omnitr_04
S35_SO-1_scaffold_66325_13

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10855..11469
DNA (615bp) protein (205aa)
GpmB; fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=5240916 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative phosphoglycerate mutase {ECO:0000313|EMBL:KHO50314.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fructose-2,6-bisphosphatase, probable phosphoglycerate mutase
S35_SO-1_scaffold_66325_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11450..12538
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase (EC:4.2.3.4)
Tax=CSP1_2_Dadabacteria
S35_SO-1_scaffold_66325_15
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

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12540..14027
DNA (1488bp) protein (496aa)
Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0M3_9BACT
aroDE; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Tax=GWF2_Planctomycetes_40_8_curated
S35_SO-1_scaffold_66325_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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14008..15261
DNA (1254bp) protein (418aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YJ92_9BACT
3-phosphoshikimate 1-carboxyvinyltransferase
S35_SO-1_scaffold_66325_17
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

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15258..15770
DNA (513bp) protein (171aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9J4_GEODF
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
S35_SO-1_scaffold_66325_18
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15772..16848
DNA (1077bp) protein (359aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
Chorismate synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6U8_METMS
S35_SO-1_scaffold_66325_19
CG_CPArch01-01, CG_CPArch01, Archaea

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16845..17690
DNA (846bp) protein (282aa)
Prephenate dehydrogenase n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SR17_METLZ
hypothetical protein
Tax=CG_CPArch01-01
S35_SO-1_scaffold_66325_20
GWC2_CPR2_39_35, CPR2, Bacteria

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17687..18496
DNA (810bp) protein (270aa)
prephenate dehydratase (EC:4.2.1.51)
P-protein id=2366964 bin=GWD1_TM7_39_7 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Tax=GWC2_CPR2_39_35
S35_SO-1_scaffold_66325_21
CG_Woesearch_01, Woesearchaeota, Archaea

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18499..20016
DNA (1518bp) protein (506aa)
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
phenylalanyl-tRNA synthetase subunit alpha
Tax=CG_Woesearch_01
S35_SO-1_scaffold_66325_22
CG_Woesearch_01, Woesearchaeota, Archaea

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20018..21673
DNA (1656bp) protein (552aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AEN0_PYRYC
phenylalanyl-tRNA synthetase subunit beta
Tax=CG_Woesearch_01
S35_SO-1_scaffold_66325_23
unknown

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21685..21900
DNA (216bp) protein (72aa)

This feature has no annotations

S35_SO-1_scaffold_66325_24
AR11, Woesearchaeaota, DPANN, Archaea

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comp(21912..22403)
DNA (492bp) protein (164aa)
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14
Tax=AR11
S35_SO-1_scaffold_66325_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(22516..22875)
DNA (360bp) protein (120aa)
50S ribosomal protein L34e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE5_METFV
50S ribosomal protein L34e
Tax=CG_Woesearch_02
S35_SO-1_scaffold_66325_26
AR11, Woesearchaeaota, DPANN, Archaea

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22915..23403
DNA (489bp) protein (163aa)
Tax=AR11
S35_SO-1_scaffold_66325_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(23397..24146)
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_66325_28
AR11, Woesearchaeaota, DPANN, Archaea

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comp(24148..25419)
DNA (1272bp) protein (424aa)
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
Tax=AR11
S35_SO-1_scaffold_66325_29

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comp(25491..25943)
DNA (453bp) protein (151aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L15P
S35_SO-1_scaffold_66325_30
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(25943..26374)
DNA (432bp) protein (144aa)
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30P
Tax=CG_Woesearch_01
Displaying items 1-30 of 49 in total

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