ggKbase home page

S35_SO-1_scaffold_58506

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_58506_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(2..601)
DNA (600bp) protein (200aa)
Nop58p-like protein pre mRNA splicing protein {ECO:0000313|EMBL:KKR78011.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_58506_2
unknown

Not on your lists

645..776
DNA (132bp) protein (44aa)

This feature has no annotations

S35_SO-1_scaffold_58506_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

972..2861
DNA (1890bp) protein (630aa)
ABC transporter; K03688 ubiquinone biosynthesis protein id=5048454 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
2-polyprenylphenol 6-hydroxylase
Tax=AR11
S35_SO-1_scaffold_58506_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2863..3369
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BD51F
Tax=AR11
S35_SO-1_scaffold_58506_5
unknown

Not on your lists

comp(3366..3611)
DNA (246bp) protein (82aa)

This feature has no annotations

S35_SO-1_scaffold_58506_6
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(3617..4294)
DNA (678bp) protein (226aa)
Uridylate kinase {ECO:0000313|EMBL:KKS65674.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
Uncharacterized protein id=5800565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
pyrH; uridylate kinase
S35_SO-1_scaffold_58506_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4353..4706)
DNA (354bp) protein (118aa)
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_58506_8

Not on your lists

comp(4708..5082)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53623.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5047440 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S35_SO-1_scaffold_58506_9

Not on your lists

comp(5123..6709)
DNA (1587bp) protein (529aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=5048449 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KHO45483.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
SecD/SecF/SecDF export membrane protein
S35_SO-1_scaffold_58506_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6706..7650)
DNA (945bp) protein (315aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
SecD/SecF/SecDF export membrane protein
Tax=AR11
S35_SO-1_scaffold_58506_11

Not on your lists

comp(7700..9421)
DNA (1722bp) protein (574aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
S35_SO-1_scaffold_58506_12
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9653..9946
DNA (294bp) protein (98aa)
TPR domain-containing protein n=1 Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EMB7_BRAIP
hypothetical protein
TPR domain-containing protein {ECO:0000313|EMBL:AEM22888.1}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 51140 / PWS/A) (Serpulina; intermedia).;"
S35_SO-1_scaffold_58506_13

Not on your lists

10082..10546
DNA (465bp) protein (155aa)
Marine sediment metagenome DNA, contig: S01H1_S25777 {ECO:0000313|EMBL:GAG36946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=3297 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
NUDIX hydrolase
S35_SO-1_scaffold_58506_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10543..11109)
DNA (567bp) protein (189aa)
membrane protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B39E1D
hypothetical protein
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
S35_SO-1_scaffold_58506_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11143..11736)
DNA (594bp) protein (198aa)
hypothetical protein id=5048442 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_58506_16

Not on your lists

11841..12446
DNA (606bp) protein (202aa)
Putative transcriptional regulator, TrmB id=5800192 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61523.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
transcriptional regulator, TrmB
S35_SO-1_scaffold_58506_17

Not on your lists

12425..13192
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS id=5103711 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62989.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_58506_18

Not on your lists

13268..13624
DNA (357bp) protein (119aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62294.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_58506_19
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13619..14260)
DNA (642bp) protein (214aa)
Thiamin-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=THIE_METMA
Thiamine-phosphate synthase {ECO:0000313|EMBL:KKH89687.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
S35_SO-1_scaffold_58506_20
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14217..15005)
DNA (789bp) protein (263aa)
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
Hydroxyethylthiazole kinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=THIM_METMA
S35_SO-1_scaffold_58506_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15031..15594)
DNA (564bp) protein (188aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase small
Tax=AR15
S35_SO-1_scaffold_58506_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15969..16799)
DNA (831bp) protein (277aa)
id=5047432 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S35_SO-1_scaffold_58506_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16799..17383)
DNA (585bp) protein (195aa)
id=5047431 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S35_SO-1_scaffold_58506_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17579..18076
DNA (498bp) protein (166aa)
Putative transcriptional regulator, PadR family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7B9_METCZ
PadR family transcriptional regulator
Tax=CG_Woesearch_02
S35_SO-1_scaffold_58506_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18073..18759
DNA (687bp) protein (229aa)
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transporter, ATPase subunit
Tax=AR15
S35_SO-1_scaffold_58506_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18787..20013
DNA (1227bp) protein (409aa)
Putative uncharacterized protein id=5800241 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_58506_27

Not on your lists

20269..21102
DNA (834bp) protein (278aa)
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61573.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S35_SO-1_scaffold_58506_28

Not on your lists

21069..21527
DNA (459bp) protein (153aa)
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61573.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S35_SO-1_scaffold_58506_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

21524..22735
DNA (1212bp) protein (404aa)
Putative uncharacterized protein id=5800243 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_58506_30
unknown

Not on your lists

comp(22929..25154)
DNA (2226bp) protein (742aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy