ggKbase home page

S36_SO-2_scaffold_2009

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_2009_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

186..914
DNA (729bp) protein (243aa)
Zinc/iron permease n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGT4_ALKOO
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:ABW18628.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
S36_SO-2_scaffold_2009_2
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1097..1834
DNA (738bp) protein (246aa)
ATP binding protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB93_METMS
ATP binding protein
ATP binding protein {ECO:0000313|EMBL:ADE36444.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
S36_SO-2_scaffold_2009_3
unknown

Not on your lists

comp(1954..2355)
DNA (402bp) protein (134aa)

This feature has no annotations

S36_SO-2_scaffold_2009_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2414..3646)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F1305
metal-dependent hydrolase
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_2009_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3741..4343
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
Metallophosphoesterase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_2009_6

Not on your lists

4395..4634
DNA (240bp) protein (80aa)
hypothetical protein id=5046756 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45944.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_2009_7

Not on your lists

4645..4926
DNA (282bp) protein (94aa)
hypothetical protein id=5046755 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45943.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_2009_8
unknown

Not on your lists

comp(4945..5250)
DNA (306bp) protein (102aa)

This feature has no annotations

S36_SO-2_scaffold_2009_9
unknown

Not on your lists

comp(5323..5658)
DNA (336bp) protein (112aa)

This feature has no annotations

S36_SO-2_scaffold_2009_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(5706..6485)
DNA (780bp) protein (260aa)
yabD; TatD-related deoxyribonuclease YabD; K03424 TatD DNase family protein [EC:3.1.21.-] id=5042290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hydrolase, TatD family
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_2009_trna_1
unknown

Not on your lists

6559..6630
DNA (72bp)
transferRNA His
S36_SO-2_scaffold_2009_11
unknown

Not on your lists

6703..6879
DNA (177bp) protein (59aa)

This feature has no annotations

S36_SO-2_scaffold_2009_12
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

6940..8265
DNA (1326bp) protein (442aa)
Protein kinase family protein id=8266900 bin=CD_OP8_4m species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase-like protein
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
S36_SO-2_scaffold_2009_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


8448..8945
DNA (498bp) protein (166aa)
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
Tax=CG_Woesearch_02
S36_SO-2_scaffold_2009_14
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


8949..9521
DNA (573bp) protein (191aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHM2_THEBM
30S ribosomal protein S9e (S4p)
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
S36_SO-2_scaffold_2009_15

Not on your lists


9505..9981
DNA (477bp) protein (159aa)
Marine sediment metagenome DNA, contig: S01H4_S05167 {ECO:0000313|EMBL:GAH02536.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
S36_SO-2_scaffold_2009_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

9978..10769
DNA (792bp) protein (264aa)
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
Tax=AR15
S36_SO-2_scaffold_2009_17
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


10766..11116
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF3_METFV
50S ribosomal protein L18ae
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S36_SO-2_scaffold_2009_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


11116..11538
DNA (423bp) protein (141aa)
50S ribosomal protein L13 n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEG3_METPE
rpl13p; 50S ribosomal protein L13
Tax=CG_Woesearch_02
S36_SO-2_scaffold_2009_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


11535..11936
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
rps9p; 30S ribosomal protein S9
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_2009_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


11957..12154
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=CG_Woesearch_03
S36_SO-2_scaffold_2009_21
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

12282..13727
DNA (1446bp) protein (482aa)
guaB; IMP dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYP2_9ARCH
S36_SO-2_scaffold_2009_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13754..14335
DNA (582bp) protein (194aa)
hypothetical protein
Putative uncharacterized protein id=5241273 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S36_SO-2_scaffold_2009_23

Not on your lists


14583..17432
DNA (2850bp) protein (950aa)
Leucyl-tRNA synthetase {ECO:0000313|EMBL:KHO50409.1}; EC=6.1.1.4 {ECO:0000313|EMBL:KHO50409.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase id=5799918 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_2009_24

Not on your lists

comp(17437..18087)
DNA (651bp) protein (217aa)
GTP cyclohydrolase II n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDK3_ARCPA
GTP cyclohydrolase II {ECO:0000313|EMBL:KKT47701.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
GTP cyclohydrolase II
S36_SO-2_scaffold_2009_25

Not on your lists

comp(18093..19274)
DNA (1182bp) protein (394aa)
Marine sediment metagenome DNA, contig: S01H1_L03665 {ECO:0000313|EMBL:GAF74202.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S36_SO-2_scaffold_2009_26
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19526..20098)
DNA (573bp) protein (191aa)
id=5048629 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S36_SO-2_scaffold_2009_27

Not on your lists

comp(20095..20415)
DNA (321bp) protein (107aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5048628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Pyruvate, water dikinase {ECO:0000313|EMBL:KHO44935.1}; EC=2.7.9.2 {ECO:0000313|EMBL:KHO44935.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
phosphoenolpyruvate synthase (EC:2.7.9.2)
S36_SO-2_scaffold_2009_28
GWE2_OD1_38_18, Parcubacteria, Bacteria

Not on your lists

comp(20433..20780)
DNA (348bp) protein (116aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=136563 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:KKQ62231.1}; TaxID=1618949 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_38_18.;"
phosphoenolpyruvate synthase
S36_SO-2_scaffold_2009_29
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20749..21891)
DNA (1143bp) protein (381aa)
id=5048627 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Displaying items 1-30 of 153 in total

View Taxonomy