ggKbase home page

S36_SO-2_scaffold_261597

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_261597_1

Not on your lists

comp(3..185)
DNA (183bp) protein (61aa)
50S ribosomal protein L31e {ECO:0000313|EMBL:KHO49880.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
S36_SO-2_scaffold_261597_2
unknown

Not on your lists

comp(189..443)
DNA (255bp) protein (85aa)

This feature has no annotations

S36_SO-2_scaffold_261597_3
unknown

Not on your lists

comp(448..732)
DNA (285bp) protein (95aa)

This feature has no annotations

S36_SO-2_scaffold_261597_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(737..910)
DNA (174bp) protein (58aa)
id=5800694 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S36_SO-2_scaffold_261597_5

Not on your lists

comp(939..1274)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51577.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S36_SO-2_scaffold_261597_6

Not on your lists


comp(1304..1831)
DNA (528bp) protein (176aa)
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S19
S36_SO-2_scaffold_261597_7

Not on your lists

comp(1934..2767)
DNA (834bp) protein (278aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
S36_SO-2_scaffold_261597_8
unknown

Not on your lists

comp(2817..3257)
DNA (441bp) protein (147aa)

This feature has no annotations

S36_SO-2_scaffold_261597_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3505..3702
DNA (198bp) protein (66aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
S36_SO-2_scaffold_261597_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3762..4097
DNA (336bp) protein (112aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S36_SO-2_scaffold_261597_11

Not on your lists

4100..6757
DNA (2658bp) protein (886aa)
Ca2+-transporting ATPase {ECO:0000313|EMBL:KHO50746.1}; EC=3.6.3.8 {ECO:0000313|EMBL:KHO50746.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Cation-transporting ATPase A, P type (ATPase, E1-E2 type) id=5800624 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
P-type HAD superfamily ATPase
S36_SO-2_scaffold_261597_12
R_OD1_Nomurabacteria_41_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6741..7451
DNA (711bp) protein (237aa)
Oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II37_NITGG
oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_18_curated
S36_SO-2_scaffold_261597_13

Not on your lists

7454..7984
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57798.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
YHS domain-containing protein
S36_SO-2_scaffold_261597_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7993..9162
DNA (1170bp) protein (390aa)
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
S36_SO-2_scaffold_261597_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9159..10130
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XL1_METBU
hydrolase
Tax=AR11
S36_SO-2_scaffold_261597_16
unknown

Not on your lists

10565..11113
DNA (549bp) protein (183aa)

This feature has no annotations

S36_SO-2_scaffold_261597_17
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11120..12262)
DNA (1143bp) protein (381aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVQ5_METHD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AGB49522.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
S36_SO-2_scaffold_261597_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12353..13114
DNA (762bp) protein (254aa)
Lipoate-protein ligase A, C-terminal id=5799643 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative biotin/lipoate A/B protein ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
S36_SO-2_scaffold_261597_19

Not on your lists

comp(13152..14522)
DNA (1371bp) protein (457aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45395.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_261597_20

Not on your lists

comp(14900..15874)
DNA (975bp) protein (325aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=5048733 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:KHO45396.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KHO45396.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transketolase, central region
S36_SO-2_scaffold_261597_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15881..16945)
DNA (1065bp) protein (355aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha id=5799638 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S36_SO-2_scaffold_261597_22
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(17001..17366)
DNA (366bp) protein (122aa)
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
putative ribonuclease VapC
Tax=CG_Micra_01
S36_SO-2_scaffold_261597_23
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(17360..17575)
DNA (216bp) protein (72aa)
hypothetical protein
Tax=AR13
S36_SO-2_scaffold_261597_24
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17797..18141)
DNA (345bp) protein (115aa)
Nucleotidyltransferase, putative n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A2E8_THEGJ
Nucleotidyltransferase
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
S36_SO-2_scaffold_261597_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18125..18427)
DNA (303bp) protein (101aa)
DNA polymerase subunit beta; K07075 id=5044623 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein region
Tax=RBG_13_Pacearchaeota_33_26_curated
S36_SO-2_scaffold_261597_26

Not on your lists

comp(18583..19473)
DNA (891bp) protein (297aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Probable lipoyl synthase id=5799637 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
lipoate synthase
S36_SO-2_scaffold_261597_27
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(19493..19795)
DNA (303bp) protein (101aa)
id=5227450 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S36_SO-2_scaffold_261597_28
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19845..20225)
DNA (381bp) protein (127aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
S36_SO-2_scaffold_261597_29
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(20296..20772)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAL58901.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
signal peptide protein
S36_SO-2_scaffold_261597_30

Not on your lists

20925..21770
DNA (846bp) protein (282aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=5046293 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thymidylate synthase {ECO:0000313|EMBL:KHO46094.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KHO46094.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
thymidylate synthase (EC:2.1.1.45)
Displaying items 1-30 of 47 in total

View Taxonomy