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S36_SO-2_scaffold_160319

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_160319_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
Tax=AR11
S36_SO-2_scaffold_160319_2
Candidatus Babela massiliensis, Candidatus Babela, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(935..1150)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=delta proteobacterium BABL1 RepID=V6DJL0_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK30701.1}; TaxID=673862 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Babela.;" source="Candidatus Babela massiliensis.;"
S36_SO-2_scaffold_160319_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1260..2090
DNA (831bp) protein (277aa)
id=5046759 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S36_SO-2_scaffold_160319_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2092..2622
DNA (531bp) protein (177aa)
Tax=AR11
S36_SO-2_scaffold_160319_5
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(2619..3398)
DNA (780bp) protein (260aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
Triosephosphate isomerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S313_DESTD
S36_SO-2_scaffold_160319_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3428..4084)
DNA (657bp) protein (219aa)
Integral membrane protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NNL6_9FIRM id=5103510 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Integral membrane protein
Tax=AR20
S36_SO-2_scaffold_160319_7
Pristionchus pacificus, Pristionchus, Diplogasterida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(4093..4518)
DNA (426bp) protein (142aa)
Major sperm protein n=1 Tax=Pristionchus pacificus RepID=H3FS08_PRIPA
Major sperm protein {ECO:0000256|RuleBase:RU003425}; TaxID=54126 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus.;" source="Pristionchus pacificus (Parasitic nematode).;"
S36_SO-2_scaffold_160319_8
unknown

Not on your lists

comp(4520..4675)
DNA (156bp) protein (52aa)

This feature has no annotations

S36_SO-2_scaffold_160319_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4741..5070)
DNA (330bp) protein (110aa)
LPBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI0002638C92
trx; thioredoxin
Tax=GWF2_RBX1_38_17_curated
S36_SO-2_scaffold_160319_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(5274..5642)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO11943.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
hypothetical protein
S36_SO-2_scaffold_160319_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5944..6309
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ id=5103294 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR11
S36_SO-2_scaffold_160319_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6381..7163
DNA (783bp) protein (261aa)
hypothetical protein
phosphoesterase; K06953 id=5240761 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_02
S36_SO-2_scaffold_160319_13

Not on your lists

comp(7160..7705)
DNA (546bp) protein (182aa)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KHO53501.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5049192 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcription regulator, containing CBS protein
S36_SO-2_scaffold_160319_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7887..9080
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5049197 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
methionine adenosyltransferase (EC:2.5.1.6)
Tax=CG_Woesearch_01
S36_SO-2_scaffold_160319_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9187..10401
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Tax=AR11
S36_SO-2_scaffold_160319_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


10480..10737
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CC000
50S ribosomal protein L35
Tax=AR11
S36_SO-2_scaffold_160319_17
unknown

Not on your lists

comp(10718..11623)
DNA (906bp) protein (302aa)

This feature has no annotations

S36_SO-2_scaffold_160319_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11764..11970)
DNA (207bp) protein (69aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_160319_19
unknown

Not on your lists

12066..12359
DNA (294bp) protein (98aa)
transposase, IS4
S36_SO-2_scaffold_160319_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12363..13253)
DNA (891bp) protein (297aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S36_SO-2_scaffold_160319_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13304..14653)
DNA (1350bp) protein (450aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
glycine hydroxymethyltransferase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626EB7
Glycine hydroxymethyltransferase {ECO:0000313|EMBL:ETW99201.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
S36_SO-2_scaffold_160319_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(14772..15200)
DNA (429bp) protein (143aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S36_SO-2_scaffold_160319_23
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

15386..15832
DNA (447bp) protein (149aa)
PROKAR_LIPOPROTEIN id=5800408 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
S36_SO-2_scaffold_160319_24
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

15840..18452
DNA (2613bp) protein (871aa)
Cu2+-exporting ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
S36_SO-2_scaffold_160319_25
unknown

Not on your lists

18487..18768
DNA (282bp) protein (94aa)

This feature has no annotations

S36_SO-2_scaffold_160319_26
Methanococcus vannielii, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

18765..20237
DNA (1473bp) protein (491aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
H(+)-transporting two-sector ATPase n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UP49_METVS
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=406327 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224).;"
S36_SO-2_scaffold_160319_27
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20252..20671
DNA (420bp) protein (140aa)
UspA domain protein n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A6E1_METM6
Universal stress protein {ECO:0000313|EMBL:AKB25508.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
UspA domain-containing protein
S36_SO-2_scaffold_160319_28

Not on your lists

comp(20698..20976)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49715.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S36_SO-2_scaffold_160319_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20973..21638)
DNA (666bp) protein (222aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S36_SO-2_scaffold_160319_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

21746..22012
DNA (267bp) protein (89aa)
Tax=AR11
Displaying items 1-30 of 40 in total

View Taxonomy