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S36_SO-2_scaffold_483812

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_483812_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1..138)
DNA (138bp) protein (46aa)
NEQ401 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74N18_NANEQ
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_483812_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(356..1402)
DNA (1047bp) protein (349aa)
Two-component system, NtrC family, transcriptional regulator n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PA19_DEFDS
two-component system, NtrC family, transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
S36_SO-2_scaffold_483812_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1690..2292)
DNA (603bp) protein (201aa)
hypothetical protein id=5046911 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_483812_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(2261..2881)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003720948
phosphoesterase PA-phosphatase-like protein
Tax=RBG_16_Pacearchaeota_35_8_curated
S36_SO-2_scaffold_483812_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2881..3915)
DNA (1035bp) protein (345aa)
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Glucosamine-1-phosphate N-acetyltransferase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_483812_6
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3917..5197)
DNA (1281bp) protein (427aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01264}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY
tRNA nucleotidyltransferase CCA-adding enzyme
S36_SO-2_scaffold_483812_7
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

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comp(5215..8967)
DNA (3753bp) protein (1251aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU06_9BACT
Gyrase subunit A protein {ECO:0000313|EMBL:KKQ76815.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
S36_SO-2_scaffold_483812_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9283..10323)
DNA (1041bp) protein (347aa)
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
Tax=AR11
S36_SO-2_scaffold_483812_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(10323..10973)
DNA (651bp) protein (217aa)
Putative uncharacterized protein id=5048378 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S36_SO-2_scaffold_483812_10
AR11, Woesearchaeaota, DPANN, Archaea

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11098..11739
DNA (642bp) protein (214aa)
hypothetical protein
Uncharacterized protein id=4143274 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=AR11
S36_SO-2_scaffold_483812_11
unknown

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comp(11814..12557)
DNA (744bp) protein (248aa)

This feature has no annotations

S36_SO-2_scaffold_483812_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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12688..13377
DNA (690bp) protein (230aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_483812_13

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13379..13621
DNA (243bp) protein (81aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_483812_14

Not on your lists

13615..14031
DNA (417bp) protein (139aa)
Marine sediment metagenome DNA, contig: S12H4_S12223 {ECO:0000313|EMBL:GAJ07382.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S36_SO-2_scaffold_483812_15
unknown

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14192..14347
DNA (156bp) protein (52aa)

This feature has no annotations

S36_SO-2_scaffold_483812_16
AR4, Woesearchaeaota, DPANN, Archaea

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14344..15462
DNA (1119bp) protein (373aa)
Uncharacterized protein id=5041607 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S36_SO-2_scaffold_483812_17
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

15662..16006
DNA (345bp) protein (115aa)
id=5048325 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_RIF_OD1_08_37_53_curated
S36_SO-2_scaffold_483812_18
unknown

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16046..16162
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 18 items

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