ggKbase home page

S36_SO-2_scaffold_557651

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_557651_1
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(47..400)
DNA (354bp) protein (118aa)
Putative transcriptional regulator n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZJ5_METHD
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGB50115.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
S36_SO-2_scaffold_557651_2
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

491..1312
DNA (822bp) protein (274aa)
UPI0002970B7E related cluster id=4350386 bin=GWC2_Chlamydiae_50_10 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S36_SO-2_scaffold_557651_3

Not on your lists

1266..2024
DNA (759bp) protein (253aa)
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein id=5240889 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cytochrome c biogenesis transmembrane protein {ECO:0000313|EMBL:AJF59881.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
S36_SO-2_scaffold_557651_4
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2123..2404
DNA (282bp) protein (94aa)
Vitamin K epoxide reductase id=2824581 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S36_SO-2_scaffold_557651_5
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2436..3488
DNA (1053bp) protein (351aa)
40-residue YVTN beta-propeller repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EB1_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:GAM11959.1}; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
YVTN beta-propeller repeat-containing protein
S36_SO-2_scaffold_557651_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3512..3835)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB40357.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei WWM610.;"
S36_SO-2_scaffold_557651_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3845..4363)
DNA (519bp) protein (173aa)
OsmC family protein id=5041601 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
redox protein, regulator of disulfide bond formation
Tax=AR4
S36_SO-2_scaffold_557651_8
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4374..4517)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=uncultured Acidilobus sp. MG RepID=V4JYD0_9CREN
hypothetical protein
Tax=AR19
S36_SO-2_scaffold_557651_9

Not on your lists

comp(4514..5011)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380F1AA
Uncharacterized protein {ECO:0000313|EMBL:KHO54533.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
S36_SO-2_scaffold_557651_10
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5021..5323)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1A68
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S36_SO-2_scaffold_557651_11

Not on your lists

comp(5421..7307)
DNA (1887bp) protein (629aa)
pcu:pc0287 cadA; putative cadmium-transporting ATPase id=138022 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE19092.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S36_SO-2_scaffold_557651_12
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(7360..7956)
DNA (597bp) protein (199aa)
Putative nickel/cobalt transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II19_NITGG
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
S36_SO-2_scaffold_557651_13

Not on your lists

comp(8073..9341)
DNA (1269bp) protein (423aa)
Divalent metal cation transporter MntH n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DR80_9BACI
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KHO52422.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NRAMP family Mn2+/Fe2+ transporter
S36_SO-2_scaffold_557651_14

Not on your lists

comp(9350..10549)
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52423.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
putative metal cation transporter id=24518455 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
zinc permease
S36_SO-2_scaffold_557651_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10552..11754)
DNA (1203bp) protein (401aa)
Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZW4_RUBXD
twin-arginine translocation pathway signal protein
Tax=AR11
S36_SO-2_scaffold_557651_16

Not on your lists

comp(11774..12172)
DNA (399bp) protein (133aa)
Uncharacterized protein id=5799671 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61002.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S36_SO-2_scaffold_557651_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

12260..12667
DNA (408bp) protein (136aa)
hypothetical protein
hypothetical protein id=5044131 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR20
S36_SO-2_scaffold_557651_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12664..14346
DNA (1683bp) protein (561aa)
hypothetical protein; K06888 id=18248524 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
S36_SO-2_scaffold_557651_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14429..15931
DNA (1503bp) protein (501aa)
cytosol aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=1250624 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=AR11
S36_SO-2_scaffold_557651_trna_1
unknown

Not on your lists

16392..16463
DNA (72bp)
transferRNA Val
S36_SO-2_scaffold_557651_20
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

16508..17281
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS44091.1}; TaxID=1618615 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
S36_SO-2_scaffold_557651_21
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(17262..17519)
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=3990086 bin=GWC2_Deltaproteobacteria_42_51 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Pacearch_04
S36_SO-2_scaffold_557651_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17552..17854)
DNA (303bp) protein (101aa)
hypothetical protein n=2 Tax=unclassified candidate division EM 19 RepID=UPI000378DCB9
hypothetical protein
Tax=AR11
S36_SO-2_scaffold_557651_23
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

17950..19383
DNA (1434bp) protein (478aa)
Coenzyme F390 synthetase-like protein id=4113345 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S36_SO-2_scaffold_557651_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19421..20062
DNA (642bp) protein (214aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YG96_THEYD id=5103622 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein-L-isoaspartate O-methyltransferase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_557651_25

Not on your lists

20171..22966
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369FE5C
Uncharacterized protein {ECO:0000313|EMBL:KHO51321.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S36_SO-2_scaffold_557651_26

Not on your lists

comp(22937..23854)
DNA (918bp) protein (306aa)
UPF0176 protein IALB_0520 id=5800321 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61652.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
sulfurtransferase
S36_SO-2_scaffold_557651_27

Not on your lists

comp(23900..25234)
DNA (1335bp) protein (445aa)
DNA/RNA helicase, superfamily II n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U6F9_9EURY id=5103581 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA/RNA helicase, superfamily II
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AJF62862.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_557651_28
unknown

Not on your lists

comp(25356..26024)
DNA (669bp) protein (223aa)

This feature has no annotations

S36_SO-2_scaffold_557651_29
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

26268..27497
DNA (1230bp) protein (410aa)
Tax=CG_CPR10_03
Displaying items 1-30 of 45 in total

View Taxonomy