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S36_SO-2_scaffold_134014

Search features with annotation key words

Displaying items 121-150 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_134014_120
unknown

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102393..102743
DNA (351bp) protein (117aa)

This feature has no annotations

S36_SO-2_scaffold_134014_121
CG_Woesearch_02, Woesearchaeota, Archaea

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102724..103107
DNA (384bp) protein (128aa)
50S ribosomal protein L18e n=1 Tax=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) RepID=B8D6F7_DESK1
50S ribosomal protein L18e
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_122

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103126..103545
DNA (420bp) protein (140aa)
50S ribosomal protein L13 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T6E8_9EURY
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L13
S36_SO-2_scaffold_134014_123

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103518..103961
DNA (444bp) protein (148aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_134014_124
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

104016..105389
DNA (1374bp) protein (458aa)
Tax=CG_Micra_03
S36_SO-2_scaffold_134014_125
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


105982..108693
DNA (2712bp) protein (904aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
leucyl-tRNA synthetase (EC:6.1.1.4)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_126
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

108696..109487
DNA (792bp) protein (264aa)
inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] id=5048517 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
inorganic polyphosphate/ATP-NAD kinase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_127
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(109499..110350)
DNA (852bp) protein (284aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=5045918 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Pacearch_05
S36_SO-2_scaffold_134014_128
unknown

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comp(110525..111370)
DNA (846bp) protein (282aa)

This feature has no annotations

S36_SO-2_scaffold_134014_129
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(111731..112663)
DNA (933bp) protein (311aa)
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_130

Not on your lists

112715..113170
DNA (456bp) protein (152aa)
exosome subunit; K07581 hypothetical protein id=5048514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45548.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_134014_131
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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113223..114047
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037E214A
transketolase, N-terminal subunit
Tax=BJP_08E140C01_Clostridiales_46_19
S36_SO-2_scaffold_134014_132
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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114049..115005
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036B2501
transketolase
Transketolase central region {ECO:0000313|EMBL:ABN53904.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
S36_SO-2_scaffold_134014_133
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

115135..115878
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037009BB
racD-1; aspartate racemase
Tax=CG_CPR10_02
S36_SO-2_scaffold_134014_134
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

115875..116972
DNA (1098bp) protein (366aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00035F80F6
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_134014_135
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

117020..119218
DNA (2199bp) protein (733aa)
DNA topoisomerase I id=5800162 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA topoisomerase 1
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_136
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

119230..120303
DNA (1074bp) protein (358aa)
Tax=RBG_13_OP8X_37_8_curated
S36_SO-2_scaffold_134014_137
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

120373..120609
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037EB0EE
MgtC/SapB transporter
MgtC/SapB transporter {ECO:0000313|EMBL:ACX67729.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
S36_SO-2_scaffold_134014_138

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comp(120744..122063)
DNA (1320bp) protein (440aa)
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45507.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_134014_139
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

122320..122919
DNA (600bp) protein (200aa)
hypothetical protein id=5043746 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
haloacid dehalogenase superfamily protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_134014_140
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

122923..123153
DNA (231bp) protein (77aa)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_141
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

123156..124583
DNA (1428bp) protein (476aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6R9_METSL
glutamyl-tRNA(gln) amidotransferase subunit A
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_142
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


124608..126404
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5043742 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_134014_143

Not on your lists


126632..127174
DNA (543bp) protein (181aa)
DITP/XTP pyrophosphatase {ECO:0000313|EMBL:KHO51307.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KHO51307.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA35_METMS
S36_SO-2_scaffold_134014_144
unknown

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127171..127845
DNA (675bp) protein (225aa)

This feature has no annotations

S36_SO-2_scaffold_134014_145

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comp(127825..128019)
DNA (195bp) protein (65aa)
id=5046312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46113.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Sulfur transfer protein involved in thiamine biosynthesis
S36_SO-2_scaffold_134014_146

Not on your lists

128300..128857
DNA (558bp) protein (186aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
S36_SO-2_scaffold_134014_147
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

128934..130991
DNA (2058bp) protein (686aa)
mcm; DNA replication initiator protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5046315 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA replication initiator Cdc21/Cdc54
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_148
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

131087..131779
DNA (693bp) protein (231aa)
Nucleic acid-binding, OB-fold-like id=5800076 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_134014_149
CG_Woesearch_01, Woesearchaeota, Archaea

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131823..132239
DNA (417bp) protein (139aa)
translation initiation factor 2 subunit beta (aeif-2b); K03238 translation initiation factor 2 subunit 2 id=5046336 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Translation initiation factor 2 subunit beta
Tax=CG_Woesearch_01
Displaying items 121-150 of 272 in total

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