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S36_SO-2_scaffold_79092

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_79092_1
unknown

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431..1579
DNA (1149bp) protein (383aa)

This feature has no annotations

S36_SO-2_scaffold_79092_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1539..2270)
DNA (732bp) protein (244aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD id=5103442 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
Tax=AR20
S36_SO-2_scaffold_79092_trna_1
unknown

Not on your lists

2615..2702
DNA (88bp)
transferRNA Leu
S36_SO-2_scaffold_79092_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2743..3954
DNA (1212bp) protein (404aa)
Tax=AR11
S36_SO-2_scaffold_79092_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3951..4499)
DNA (549bp) protein (183aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZNT6_MELRP
thiol-disulfide isomerase or thioredoxin
Thiol-disulfide isomerase or thioredoxin {ECO:0000313|EMBL:AFN73684.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S36_SO-2_scaffold_79092_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4510..4839)
DNA (330bp) protein (110aa)
Export-related chaperone CsaA n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GM85_9BACT
export-related chaperone CsaA
Tax=RBG_16_Micrarchaeota_36_9_curated
S36_SO-2_scaffold_79092_6
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5290..6210)
DNA (921bp) protein (307aa)
Proline iminopeptidase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WMM3_9EURY
mhpC; proline iminopeptidase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
S36_SO-2_scaffold_79092_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6307..8037
DNA (1731bp) protein (577aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/DEAH box helicase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_8
unknown

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8164..8412
DNA (249bp) protein (83aa)

This feature has no annotations

S36_SO-2_scaffold_79092_9

Not on your lists

comp(8426..8809)
DNA (384bp) protein (128aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO46618.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO46618.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
peptidyl-tRNA hydrolase
S36_SO-2_scaffold_79092_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8845..9468)
DNA (624bp) protein (208aa)
seg id=5799838 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(10058..10654)
DNA (597bp) protein (199aa)
transmembrane_regions id=5044053 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_12
unknown

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comp(10748..11338)
DNA (591bp) protein (197aa)

This feature has no annotations

S36_SO-2_scaffold_79092_13
unknown

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comp(11382..11894)
DNA (513bp) protein (171aa)

This feature has no annotations

S36_SO-2_scaffold_79092_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12046..13536
DNA (1491bp) protein (497aa)
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_79092_15

Not on your lists

comp(13549..14511)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
Marine sediment metagenome DNA, contig: S06H3_S00013 {ECO:0000313|EMBL:GAI32157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Filamentation induced by cAMP protein Fic
S36_SO-2_scaffold_79092_16
unknown

Not on your lists

14858..15586
DNA (729bp) protein (243aa)

This feature has no annotations

S36_SO-2_scaffold_79092_17
unknown

Not on your lists

15666..16877
DNA (1212bp) protein (404aa)

This feature has no annotations

S36_SO-2_scaffold_79092_18
unknown

Not on your lists

comp(16874..18493)
DNA (1620bp) protein (540aa)

This feature has no annotations

S36_SO-2_scaffold_79092_19
unknown

Not on your lists

comp(18532..18984)
DNA (453bp) protein (151aa)

This feature has no annotations

S36_SO-2_scaffold_79092_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19115..19513)
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000344DCF9
putative nucleic acid-binding protein, contains PIN domain
S36_SO-2_scaffold_79092_21
unknown

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comp(19513..19740)
DNA (228bp) protein (76aa)

This feature has no annotations

S36_SO-2_scaffold_79092_22

Not on your lists

19852..20670
DNA (819bp) protein (273aa)
Marine sediment metagenome DNA, contig: S12H4_S07920 {ECO:0000313|EMBL:GAI97973.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
carbohydrate kinase
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S36_SO-2_scaffold_79092_23
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

20729..20977
DNA (249bp) protein (83aa)
# 1908 # 2153 # 1 # ;gc_cont=0.435 id=18311501 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02259.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
S36_SO-2_scaffold_79092_24

Not on your lists

20990..21418
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JHI9_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37997.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
S36_SO-2_scaffold_79092_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

21527..23053
DNA (1527bp) protein (509aa)
seg id=5800821 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23114..23851
DNA (738bp) protein (246aa)
coiled-coil id=5043951 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S36_SO-2_scaffold_79092_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

23891..25861
DNA (1971bp) protein (657aa)
Putative uncharacterized protein id=5800820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_28
unknown

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comp(25896..26033)
DNA (138bp) protein (46aa)

This feature has no annotations

S36_SO-2_scaffold_79092_29

Not on your lists

comp(26039..27715)
DNA (1677bp) protein (559aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
Displaying items 1-30 of 132 in total

View Taxonomy