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S36_SO-2_scaffold_193608

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_193608_1
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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1..3435
DNA (3435bp) protein (1145aa)
peptidase S16, Lon-like protease (EC:3.4.21.53)
Peptidase S16, Lon-like protease {ECO:0000313|EMBL:ADB57720.1}; EC=3.4.21.53 {ECO:0000313|EMBL:ADB57720.1};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Peptidase S16, Lon-like protease n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHE5_ARCPA
S36_SO-2_scaffold_193608_2
CG_Woesearch_01, Woesearchaeota, Archaea

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3432..4793
DNA (1362bp) protein (454aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5047490 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative ATP-dependent protease
Tax=CG_Woesearch_01
S36_SO-2_scaffold_193608_3
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4790..6070)
DNA (1281bp) protein (427aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
Homoserine dehydrogenase n=5 Tax=Pelosinus fermentans RepID=I8RU71_9FIRM
homoserine dehydrogenase
S36_SO-2_scaffold_193608_4
AR9, Woesearchaeaota, DPANN, Archaea

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6175..7185
DNA (1011bp) protein (337aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR9
S36_SO-2_scaffold_193608_5
unknown

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comp(7125..8888)
DNA (1764bp) protein (588aa)

This feature has no annotations

S36_SO-2_scaffold_193608_6

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9491..10177
DNA (687bp) protein (229aa)
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR id=5102941 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:AJF62222.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_193608_7
CG_Woesearch_01, Woesearchaeota, Archaea

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10284..11003
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_193608_8
unknown

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10993..11724
DNA (732bp) protein (244aa)

This feature has no annotations

S36_SO-2_scaffold_193608_9
unknown

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12107..12298
DNA (192bp) protein (64aa)

This feature has no annotations

S36_SO-2_scaffold_193608_10
unknown

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comp(12313..12525)
DNA (213bp) protein (71aa)

This feature has no annotations

S36_SO-2_scaffold_193608_11
AR18, Woesearchaeaota, DPANN, Archaea

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12597..13235
DNA (639bp) protein (213aa)
hypothetical protein id=5049618 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative membrane-associated protein
Tax=AR18
S36_SO-2_scaffold_193608_trna_1
unknown

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13451..13522
DNA (72bp)
transferRNA Ile
S36_SO-2_scaffold_193608_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(13529..13891)
DNA (363bp) protein (121aa)
Probable ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4X0_9EURY id=5103339 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative ribonuclease VapC
Tax=RBG_13_Pacearchaeota_36_9_curated
S36_SO-2_scaffold_193608_13
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(13906..14127)
DNA (222bp) protein (74aa)
Tax=CG_Pacearch_03
S36_SO-2_scaffold_193608_14
unknown

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14305..14760
DNA (456bp) protein (152aa)

This feature has no annotations

S36_SO-2_scaffold_193608_15
unknown

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14742..15440
DNA (699bp) protein (233aa)

This feature has no annotations

S36_SO-2_scaffold_193608_16
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(15470..15919)
DNA (450bp) protein (150aa)
hypothetical protein
id=5103172 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_02
S36_SO-2_scaffold_193608_17
unknown

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comp(15995..16633)
DNA (639bp) protein (213aa)

This feature has no annotations

S36_SO-2_scaffold_193608_18
unknown

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comp(16647..17879)
DNA (1233bp) protein (411aa)

This feature has no annotations

S36_SO-2_scaffold_193608_19
unknown

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18087..18767
DNA (681bp) protein (227aa)

This feature has no annotations

S36_SO-2_scaffold_193608_20
R_PER_ii_51_9, PER-ii, Bacteria

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18867..19085
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_9_curated
S36_SO-2_scaffold_193608_21
CG_Woesearch_01, Woesearchaeota, Archaea

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19183..19995
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
integrase family protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_193608_22
unknown

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20417..20698
DNA (282bp) protein (94aa)

This feature has no annotations

S36_SO-2_scaffold_193608_23
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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20688..21167
DNA (480bp) protein (160aa)
PilT protein domain protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWN0_METMJ
twitching motility protein PilT
Tax=BJP_IG2102_Methanoregula_52_95
S36_SO-2_scaffold_193608_24

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21192..21584
DNA (393bp) protein (131aa)
translation initiation factor 5A; K03263 translation initiation factor 5A id=5041911 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 5A {ECO:0000313|EMBL:KHO47339.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
S36_SO-2_scaffold_193608_25
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(21581..22144)
DNA (564bp) protein (188aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
Tax=CG_Woesearch_02
Displaying 26 items

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