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S36_SO-2_scaffold_237587

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_237587_1
CG_Woesearch_01, Woesearchaeota, Archaea

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124..2055
DNA (1932bp) protein (644aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ
Tax=CG_Woesearch_01
S36_SO-2_scaffold_237587_2
unknown

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comp(2052..2516)
DNA (465bp) protein (155aa)

This feature has no annotations

S36_SO-2_scaffold_237587_3
CG_Woesearch_02, Woesearchaeota, Archaea

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2526..3239
DNA (714bp) protein (238aa)
rps3ae; 30S ribosomal protein S3AE; K02984 small subunit ribosomal protein S3Ae id=5043666 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S3ae
Tax=CG_Woesearch_02
S36_SO-2_scaffold_237587_4
CG_Woesearch_01, Woesearchaeota, Archaea

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3400..5925
DNA (2526bp) protein (842aa)
id=5045807 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_237587_5
CG_Woesearch_01, Woesearchaeota, Archaea

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5999..7474
DNA (1476bp) protein (492aa)
secretory protein kinase; K07332 archaeal flagellar protein FlaI id=5044201 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Secretory protein kinase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_237587_6
CG_Woesearch_01, Woesearchaeota, Archaea

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7535..8353
DNA (819bp) protein (273aa)
gspF1; type II secretion system protein F GspF1; K07333 archaeal flagellar protein FlaJ id=5045809 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type II secretion system protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_237587_7
CG_Woesearch_01, Woesearchaeota, Archaea

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8395..9435
DNA (1041bp) protein (347aa)
gspF2; type II secretion system protein F GspF2 id=5045810 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type II secretion system protein F GspF2
Tax=CG_Woesearch_01
S36_SO-2_scaffold_237587_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(9370..10173)
DNA (804bp) protein (268aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
Pseudouridine synthase n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R5S6_THETN
RsuA2; 16S rRNA uridine-516 pseudouridylate synthase
S36_SO-2_scaffold_237587_9
unknown

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comp(10203..10730)
DNA (528bp) protein (176aa)

This feature has no annotations

S36_SO-2_scaffold_237587_trna_1
unknown

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10298..10442
DNA (145bp)
transferRNA Arg
S36_SO-2_scaffold_237587_10
unknown

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10731..11306
DNA (576bp) protein (192aa)

This feature has no annotations

S36_SO-2_scaffold_237587_11
AR19, Pacearchaeaota, DPANN, Archaea

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11410..11643
DNA (234bp) protein (78aa)
glutaredoxin-like protein
glutaredoxin-like protein id=5241603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR19
S36_SO-2_scaffold_237587_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11646..12842)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_237587_13
unknown

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comp(12871..13287)
DNA (417bp) protein (139aa)

This feature has no annotations

S36_SO-2_scaffold_237587_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(13435..14448)
DNA (1014bp) protein (338aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_237587_15
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(14554..18843)
DNA (4290bp) protein (1430aa)
Putative lipoprotein-like protein n=1 Tax=Adineta vaga RepID=B3G4E2_ADIVA
Putative lipoprotein-like protein {ECO:0000313|EMBL:ACD54690.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
hypothetical protein
S36_SO-2_scaffold_237587_16
unknown

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18910..20259
DNA (1350bp) protein (450aa)

This feature has no annotations

S36_SO-2_scaffold_237587_17
unknown

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20305..20634
DNA (330bp) protein (110aa)

This feature has no annotations

S36_SO-2_scaffold_237587_18
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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20634..20897
DNA (264bp) protein (88aa)
Transcription regulator SpoVT/AbrB family n=1 Tax=Thermococcus sp. AM4 RepID=B7R0V9_9EURY
transcription regulator, SpoVT/AbrB family
Tax=RBG_16_Micrarchaeota_49_10_curated
S36_SO-2_scaffold_237587_19
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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20902..21240
DNA (339bp) protein (113aa)
Transcriptional modulator of MazE/toxin, MazF id=3476710 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative transcriptional modulator of MazE/toxin, MazF
Tax=GWC2_Nitrospirae_42_7_curated
S36_SO-2_scaffold_237587_20

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21937..22548
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG48_HALWC id=5103808 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63086.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 21 items

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