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AB_03_bin_175_scaffold_4364

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_175_scaffold_4364_trna_5
unknown

Not on your lists

comp(54..127)
DNA (74bp)
transferRNA Val
AB_03_bin_175_scaffold_4364_trna_1
unknown

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338..411
DNA (74bp)
transferRNA Glu
AB_03_bin_175_scaffold_4364_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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463..1158
DNA (696bp) protein (232aa)
nnrE; NAD(P)H-hydrate epimerase (EC:5.1.99.6)
NAD(P)H-hydrate epimerase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3Z7_9ARCH
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
AB_03_bin_175_scaffold_4364_2
unknown

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1166..1408
DNA (243bp) protein (81aa)

This feature has no annotations

AB_03_bin_175_scaffold_4364_trna_2
unknown

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1440..1523
DNA (84bp)
transferRNA Leu
AB_03_bin_175_scaffold_4364_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1588..1728
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8I6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57591.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
AB_03_bin_175_scaffold_4364_4
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1805..2848)
DNA (1044bp) protein (348aa)
Orc1/cdc6 family replication initiation protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LIF7_9EURY
orc / cell division control protein 6
Orc / cell division control protein 6 {ECO:0000313|EMBL:AHF98655.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
AB_03_bin_175_scaffold_4364_5
unknown

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comp(2868..3071)
DNA (204bp) protein (68aa)

This feature has no annotations

AB_03_bin_175_scaffold_4364_trna_4
unknown

Not on your lists

comp(3111..3217)
DNA (107bp)
transferRNA Met
AB_03_bin_175_scaffold_4364_6
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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3287..3949
DNA (663bp) protein (221aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
Ribonuclease HII n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ID87_ACIB4
ribonuclease HII
AB_03_bin_175_scaffold_4364_7
AR5, Aenigmarchaeota, DPANN, Archaea

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3988..4647
DNA (660bp) protein (220aa)
Peptidase S54, rhomboid family protein id=4688817 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peptidase S54, rhomboid family protein
Tax=AR5
AB_03_bin_175_scaffold_4364_8
unknown

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4661..5047
DNA (387bp) protein (129aa)

This feature has no annotations

AB_03_bin_175_scaffold_4364_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5116..7872
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DY3_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82955.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
AB_03_bin_175_scaffold_4364_10
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(8002..8949)
DNA (948bp) protein (316aa)
Replication factor C small subunit n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH38_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rfcS; replication factor C small subunit
AB_03_bin_175_scaffold_4364_11
CG_Micra_01, Micraarchaeota, Archaea

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9050..11185
DNA (2136bp) protein (712aa)
hypothetical protein id=5044060 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transglutaminase protein
Tax=CG_Micra_01
AB_03_bin_175_scaffold_4364_12
unknown

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11221..11391
DNA (171bp) protein (57aa)

This feature has no annotations

AB_03_bin_175_scaffold_4364_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

11397..11954
DNA (558bp) protein (186aa)
adenylate kinase (EC:2.7.4.3)
Putative adenylate kinase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXE5_METFV
Tax=CG_Aenigma_01
AB_03_bin_175_scaffold_4364_14
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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12007..12180
DNA (174bp) protein (58aa)
# 8830 # 8991 # 1 # ;gc_cont=0.444 id=18311068 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02684.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_03_bin_175_scaffold_4364_15
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12415..13245
DNA (831bp) protein (277aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVY5_METHD
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGB49617.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
AB_03_bin_175_scaffold_4364_trna_3
unknown

Not on your lists

13408..13480
DNA (73bp)
transferRNA Thr
AB_03_bin_175_scaffold_4364_16
unknown

Not on your lists

13414..13656
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 21 items

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