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AB_1215_Bin_116.fna_scaffold_4101

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_4101_1
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..561)
DNA (561bp) protein (187aa)
sat:SYN_00938 phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] id=92461 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
phosphomannomutase
Tax=CG_Falkow_02
AB_1215_Bin_116.fna_scaffold_4101_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

728..1732
DNA (1005bp) protein (335aa)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Saccharomonospora saliphila RepID=UPI0003681A33
glyceraldehyde-3-phosphate dehydrogenase, type I
Tax=CG_Woesearch_02
AB_1215_Bin_116.fna_scaffold_4101_3

Not on your lists

1803..3194
DNA (1392bp) protein (464aa)
3-phosphoglycerate kinase, phosphoglycerate kinase (EC:2.7.2.3)
Pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5241458 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_4101_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3199..4206
DNA (1008bp) protein (336aa)
4fe-4S ferredoxin, iron-sulfur binding protein, putative n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T0Q4_SYNGF
4fe-4S ferredoxin iron-sulfur binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_116.fna_scaffold_4101_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4203..5030
DNA (828bp) protein (276aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XBZ4_THEPJ
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=CG_Dehalo_02
AB_1215_Bin_116.fna_scaffold_4101_6
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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5027..5800
DNA (774bp) protein (258aa)
NADH:ubiquinone oxidoreductase {ECO:0000313|EMBL:KHE91787.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
NADH ubiquinone oxidoreductase 20 kDa subunit id=15194156 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_NOV_55_46 organism_group=Proteobacteria
NADH ubiquinone oxidoreductase 20 kDa subunit
AB_1215_Bin_116.fna_scaffold_4101_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5802..7091
DNA (1290bp) protein (430aa)
hydrogenase/sulfur reductase, alpha subunit
hydrogenase/sulfur reductase, alpha subunit id=5240634 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_116.fna_scaffold_4101_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7168..8538
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000373776F
Ig-like domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
AB_1215_Bin_116.fna_scaffold_4101_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(8520..8909)
DNA (390bp) protein (130aa)
Uncharacterized protein id=15190945 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_116.fna_scaffold_4101_10

Not on your lists

8955..9869
DNA (915bp) protein (305aa)
hypothetical protein
hypothetical protein id=5240632 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59625.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_4101_11

Not on your lists

9850..10587
DNA (738bp) protein (246aa)
hypothetical protein
id=5240631 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59624.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_4101_12

Not on your lists

10587..12623
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4E6_SALRM
Uncharacterized protein {ECO:0000313|EMBL:KKN20857.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fibronectin
AB_1215_Bin_116.fna_scaffold_4101_13
unknown

Not on your lists

comp(12774..12917)
DNA (144bp) protein (48aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12914..13114)
DNA (201bp) protein (67aa)
hypC; hydrogenase maturation factor; K04653 hydrogenase expression/formation protein HypC id=2780 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hydrogenase assembly chaperone HypC/HupF
Tax=RBG_16_Euryarchaeota_68_12_curated
AB_1215_Bin_116.fna_scaffold_4101_15
unknown

Not on your lists

comp(13116..14150)
DNA (1035bp) protein (345aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_16
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14205..14381
DNA (177bp) protein (59aa)
Ferredoxin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQQ5_METAC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AAM04899.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
AB_1215_Bin_116.fna_scaffold_4101_17
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

14388..14585
DNA (198bp) protein (66aa)
4-oxalocrotonate tautomerase n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U155_THEAM
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ADG90855.1}; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermosphaera.;" source="Thermosphaera aggregans (strain DSM 11486 / M11TL).;"
AB_1215_Bin_116.fna_scaffold_4101_18
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

14592..15782
DNA (1191bp) protein (397aa)
Digeranylgeranylglycerophospholipid reductase {ECO:0000255|HAMAP-Rule:MF_01287}; Short=DGGGPL reductase {ECO:0000255|HAMAP-Rule:MF_01287};; EC=1.3.99.34 {ECO:0000255|HAMAP-Rule:MF_01287};; 2,3-bis-O-geranylgeranylglyceryl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_01287}; Geranylgeranyl reductase {ECO:0000255|HAMAP-Rule:MF_01287}; Short=GGR {ECO:0000255|HAMAP-Rule:MF_01287};; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
Digeranylgeranylglycerophospholipid reductase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=GGR_PYRAB
bchP; bacteriochlorophyll synthase 43 kDa subunit or geranylgeranyl hydrogenase
AB_1215_Bin_116.fna_scaffold_4101_19
unknown

Not on your lists

15874..16476
DNA (603bp) protein (201aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_20
unknown

Not on your lists

comp(16632..16931)
DNA (300bp) protein (100aa)
hypothetical protein
AB_1215_Bin_116.fna_scaffold_4101_21
unknown

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comp(16876..17115)
DNA (240bp) protein (80aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_22
CG_CPR03_01, CG_CPR03, Bacteria

Not on your lists

comp(17196..17744)
DNA (549bp) protein (183aa)
Hydrolase family protein id=2150835 bin=GWE2_CPR3_35_7 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
hypothetical protein
Tax=CG_CPR03_01
AB_1215_Bin_116.fna_scaffold_4101_23

Not on your lists

17811..18932
DNA (1122bp) protein (374aa)
hypothetical protein
hypothetical protein id=5241453 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60444.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_4101_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(18967..19245)
DNA (279bp) protein (93aa)
hypothetical protein
Putative uncharacterized protein id=5241452 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_4101_25
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

19368..20315
DNA (948bp) protein (316aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Radical SAM protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLN1_THELI
radical SAM protein
AB_1215_Bin_116.fna_scaffold_4101_26
unknown

Not on your lists

20539..20826
DNA (288bp) protein (96aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_27
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(20850..21476)
DNA (627bp) protein (209aa)
Protein Theam_0108 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T377_THEA1
AMMECR1 domain protein
Protein Theam_0108 {ECO:0000256|HAMAP-Rule:MF_00645}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
AB_1215_Bin_116.fna_scaffold_4101_28
unknown

Not on your lists

comp(21477..22076)
DNA (600bp) protein (200aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_4101_29
AR10, Diapherotrites, DPANN, Archaea

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22211..24904
DNA (2694bp) protein (898aa)
hypothetical protein
transmembrane_regions id=5241447 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying 29 items

View Taxonomy