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AB_1215_Bin_116.fna_scaffold_9378

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_9378_1

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2..190
DNA (189bp) protein (63aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_9378_2
AR10, Diapherotrites, DPANN, Archaea

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190..1455
DNA (1266bp) protein (422aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5241337 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_9378_3

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1467..1778
DNA (312bp) protein (104aa)
50S ribosomal protein L30, large subunit ribosomal protein L30e {ECO:0000313|EMBL:KHO55780.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_9378_4
AR10, Diapherotrites, DPANN, Archaea

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1794..2207
DNA (414bp) protein (138aa)
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5241339 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_9378_5

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2219..2647
DNA (429bp) protein (143aa)
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_9378_6

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2659..3261
DNA (603bp) protein (201aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:AJF60332.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_9378_7
AR10, Diapherotrites, DPANN, Archaea

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3277..5469
DNA (2193bp) protein (731aa)
fusA; elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5241342 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_9378_8

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5533..6387
DNA (855bp) protein (285aa)
SPFH protein
SPFH domain-containing protein id=5240725 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
SPFH protein {ECO:0000313|EMBL:AJF59718.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_9378_9
CG_Pacearch_06, Pacearchaeota, Archaea

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7086..7379
DNA (294bp) protein (98aa)
CopG family transcripitonal regulator n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364B2FD
hypothetical protein
Tax=CG_Pacearch_06
AB_1215_Bin_116.fna_scaffold_9378_10
AR10, Diapherotrites, DPANN, Archaea

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comp(7366..7788)
DNA (423bp) protein (141aa)
hypothetical protein
PIN domain-like id=5241292 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_9378_11
AR10, Diapherotrites, DPANN, Archaea

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8002..9297
DNA (1296bp) protein (432aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5241343 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_9378_12

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9437..9745
DNA (309bp) protein (103aa)
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 id=5241344 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_9378_13
CG_Pacearch_05, Pacearchaeota, Archaea

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9831..10040
DNA (210bp) protein (70aa)
Tax=CG_Pacearch_05
AB_1215_Bin_116.fna_scaffold_9378_14
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

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10347..10802
DNA (456bp) protein (152aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q2W3_NITSB
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
AB_1215_Bin_116.fna_scaffold_9378_15
unknown

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10851..10997
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 15 items

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