ggKbase home page

AB_1215_Bin_123.fna_scaffold_152779_4

Organism: AB_1215_Bin_123

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: 1362..2000

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family protein id=24561721 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 215.0
  • Bit_score: 177
  • Evalue 1.20e-41
peptidase S54, rhomboid domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 218.0
  • Bit_score: 174
  • Evalue 2.30e-41
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 221.0
  • Bit_score: 183
  • Evalue 2.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 639
ATGCCTGAAATATCAAGACAATTCTTTCCTTACGAAGACATAAACAAACCAGAACACAAACCCATAATAACAATCGCGCTAATCATCACAAACATCATAATCTTCGCAATCAGCCTCGCAAACTTCAAAGAAATAATATACACCTACGGCTTCACAGCAGCCAGCCCCGCACTAACAACAGCCATCACATCAATGTTTCTGCACGGCGGCTTCGGCCACATACTCGGAAACATGTGGTACCTCTGGCTCTTCGGCGACAACATAGAAGACAAATTCGGAAAAATCAGATACATCGCAATATACATTTTATCAGGAATGATTGCACTGGCAACCCAATACCTGACAGACCCCGCATCACAAACACCTGTAATCGGCGCAAGCGGCGCAATATCCGGCCTGCTCGGCGCATACCTCGTACTCTTCCCGAAAGTCGTAGTAAAAACAATAGGCCCATTCTACCAGATATACCGGATAAAAGCCAAATACCTCATAGCCCTGTGGTTCGCGATACAACTTATCCTCGGAACCCTAAGCATAATCGGCGACAGCGCCTCAAACATAGCATTCTTTGCACACATCGGCGGCTTCCTCGCAGGCCTGCTTGCAGGCATCATCTACAAGATAAAAAATCATAAATAG
PROTEIN sequence
Length: 213
MPEISRQFFPYEDINKPEHKPIITIALIITNIIIFAISLANFKEIIYTYGFTAASPALTTAITSMFLHGGFGHILGNMWYLWLFGDNIEDKFGKIRYIAIYILSGMIALATQYLTDPASQTPVIGASGAISGLLGAYLVLFPKVVVKTIGPFYQIYRIKAKYLIALWFAIQLILGTLSIIGDSASNIAFFAHIGGFLAGLLAGIIYKIKNHK*