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AB_1215_Bin_123

DPANN_genomes_binning_unknown_42_0
In projects: DPANN_genomes_binning  |  DPANN

Consensus taxonomy:

Metagenomic Context

Parent: DPANN_genomes_binning_UNK

Properties

Avg. coverage: 0.02 Longest contig: 64.31 Kbp Bin length: 1.75 Mbp GC content: 41.61 %
Contigs count: 225 Features count: 2056 rRNAs count: 0 tRNAs count: 27

Genome completeness

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Displaying items 1-50 of 225 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
AB_1215_Bin_123.fna_scaffold_1212 68 64308 bp 42.57 0.00 88.53
AB_1215_Bin_123.fna_scaffold_5399 42 37451 bp 41.02 0.00 90.99
AB_1215_Bin_123.fna_scaffold_2641
Domain: Archaea (52.63%)
38 45826 bp 42.57 0.00 89.58
AB_1215_Bin_123.fna_scaffold_1235
Domain: Archaea (56.76%)
37 32963 bp 42.47 0.00 90.47
AB_1215_Bin_123.fna_scaffold_1511 32 34867 bp 40.08 0.00 85.65
AB_1215_Bin_123.fna_scaffold_3685
Domain: Archaea (56.67%)
30 27181 bp 39.65 0.01 86.64
AB_1215_Bin_123.fna_scaffold_17600 30 25286 bp 42.30 0.01 86.54
AB_1215_Bin_123.fna_scaffold_8936 26 23581 bp 41.42 0.01 85.33
AB_1215_Bin_123.fna_scaffold_11224 26 21312 bp 42.11 0.01 89.63
AB_1215_Bin_123.fna_scaffold_27017
Domain: Archaea (66.67%)
24 16839 bp 40.20 0.01 85.46
AB_1215_Bin_123.fna_scaffold_9396
Domain: Archaea (54.17%)
24 23939 bp 41.04 0.01 93.50
AB_1215_Bin_123.fna_scaffold_11852
Domain: Archaea (58.33%)
24 20096 bp 40.63 0.01 85.75
AB_1215_Bin_123.fna_scaffold_22961 23 12931 bp 44.01 0.01 89.76
AB_1215_Bin_123.fna_scaffold_5788
Domain: Archaea (73.91%)
23 14311 bp 39.92 0.01 91.12
AB_1215_Bin_123.fna_scaffold_11354 23 18536 bp 42.72 0.01 58.66
AB_1215_Bin_123.fna_scaffold_11567 23 11990 bp 40.73 0.01 81.46
AB_1215_Bin_123.fna_scaffold_27764
Domain: Archaea (77.27%)
22 15601 bp 44.20 0.01 89.17
AB_1215_Bin_123.fna_scaffold_11232 22 20606 bp 39.77 0.01 93.41
AB_1215_Bin_123.fna_scaffold_5296 21 21206 bp 37.89 0.01 89.39
AB_1215_Bin_123.fna_scaffold_21705 21 21475 bp 42.54 0.01 79.70
AB_1215_Bin_123.fna_scaffold_23011 20 17102 bp 40.52 0.01 91.64
AB_1215_Bin_123.fna_scaffold_6176 19 17153 bp 45.24 0.01 89.79
AB_1215_Bin_123.fna_scaffold_11987 19 12945 bp 41.23 0.01 81.96
AB_1215_Bin_123.fna_scaffold_36509 18 14021 bp 42.73 0.01 89.09
AB_1215_Bin_123.fna_scaffold_3555 18 17897 bp 39.56 0.01 88.66
AB_1215_Bin_123.fna_scaffold_10980
Domain: Bacteria (50%)
18 16645 bp 41.57 0.01 88.53
AB_1215_Bin_123.fna_scaffold_12416 18 14130 bp 40.83 0.01 82.48
AB_1215_Bin_123.fna_scaffold_14652
Domain: Archaea (55.56%)
18 17398 bp 43.83 0.01 88.79
AB_1215_Bin_123.fna_scaffold_27542 17 14047 bp 43.75 0.01 83.19
AB_1215_Bin_123.fna_scaffold_29023 17 13190 bp 40.92 0.01 83.70
AB_1215_Bin_123.fna_scaffold_5646 17 14240 bp 41.57 0.01 85.53
AB_1215_Bin_123.fna_scaffold_11731 17 9807 bp 40.17 0.02 87.18
AB_1215_Bin_123.fna_scaffold_18873 17 12038 bp 39.95 0.01 83.09
AB_1215_Bin_123.fna_scaffold_36433 16 12485 bp 41.30 0.01 81.07
AB_1215_Bin_123.fna_scaffold_10183 16 10550 bp 42.46 0.01 84.82
AB_1215_Bin_123.fna_scaffold_11088
Domain: Archaea (62.5%)
16 15814 bp 42.77 0.01 89.01
AB_1215_Bin_123.fna_scaffold_11888 16 13688 bp 40.40 0.01 93.26
AB_1215_Bin_123.fna_scaffold_13288
Phylum: Euryarchaeota (56.25%)
16 10400 bp 43.36 0.01 90.95
AB_1215_Bin_123.fna_scaffold_66751 15 10909 bp 38.75 0.01 84.32
AB_1215_Bin_123.fna_scaffold_15780
Domain: Archaea (53.33%)
15 15854 bp 44.61 0.01 77.11
AB_1215_Bin_123.fna_scaffold_16767 15 8153 bp 41.15 0.02 88.53
AB_1215_Bin_123.fna_scaffold_23066
Domain: Archaea (64.29%)
14 9975 bp 43.04 0.02 77.71
AB_1215_Bin_123.fna_scaffold_20866
Domain: Archaea (50%)
14 10869 bp 43.16 0.01 87.09
AB_1215_Bin_123.fna_scaffold_34237
Domain: Archaea (53.85%)
13 10901 bp 44.07 0.01 91.95
AB_1215_Bin_123.fna_scaffold_38950
Domain: Archaea (92.31%)
13 6045 bp 41.60 0.02 97.92
AB_1215_Bin_123.fna_scaffold_66192 13 16844 bp 39.65 0.01 85.69
AB_1215_Bin_123.fna_scaffold_71356 13 8208 bp 40.20 0.02 78.91
AB_1215_Bin_123.fna_scaffold_12739
Domain: Archaea (61.54%)
13 9397 bp 40.72 0.02 89.45
AB_1215_Bin_123.fna_scaffold_28187
Domain: Archaea (50%)
12 9746 bp 42.44 0.02 88.99
AB_1215_Bin_123.fna_scaffold_28827
Domain: Archaea (58.33%)
12 8397 bp 40.31 0.02 90.91
Displaying items 1-50 of 225 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.