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AB_1215_Bin_123.fna_scaffold_11354

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_123.fna_scaffold_11354_1
unknown

Not on your lists

336..800
DNA (465bp) protein (155aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11354_2

Not on your lists

comp(807..1646)
DNA (840bp) protein (280aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=5048864 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
AB_1215_Bin_123.fna_scaffold_11354_3
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1931..3511)
DNA (1581bp) protein (527aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AKB80119.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AKB80119.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLP8_METZD
AB_1215_Bin_123.fna_scaffold_11354_4
unknown

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comp(3768..3881)
DNA (114bp) protein (38aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11354_5
MPI_TA06_32_111, Bacteria

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comp(3928..4998)
DNA (1071bp) protein (357aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Serine--pyruvate aminotransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CHM6_9CLOT
Tax=MPI_TA06_32_111
AB_1215_Bin_123.fna_scaffold_11354_trna_5
unknown

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comp(5237..5310)
DNA (74bp)
transferRNA Arg
AB_1215_Bin_123.fna_scaffold_11354_6
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(5449..5907)
DNA (459bp) protein (153aa)
Endonuclease IV n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WMX9_9EURY
Endonuclease IV {ECO:0000313|EMBL:ENO12417.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
endonuclease IV
AB_1215_Bin_123.fna_scaffold_11354_7
unknown

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comp(6247..6420)
DNA (174bp) protein (58aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11354_8
unknown

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comp(9651..10088)
DNA (438bp) protein (146aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11354_trna_4
unknown

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comp(9902..9974)
DNA (73bp)
transferRNA Ala
AB_1215_Bin_123.fna_scaffold_11354_9
unknown

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comp(12123..13604)
DNA (1482bp) protein (494aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11354_trna_3
unknown

Not on your lists

comp(13662..13745)
DNA (84bp)
transferRNA Leu
AB_1215_Bin_123.fna_scaffold_11354_trna_2
unknown

Not on your lists

comp(13840..13913)
DNA (74bp)
transferRNA Pseudo
AB_1215_Bin_123.fna_scaffold_11354_10
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(13899..14138)
DNA (240bp) protein (80aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=RBG_13_Bathyarchaeota_52_12_curated
AB_1215_Bin_123.fna_scaffold_11354_11
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


comp(14149..14568)
DNA (420bp) protein (140aa)
30S ribosomal protein S9 n=2 Tax=Thermococcus RepID=B7R322_9EURY
30S ribosomal protein S9
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_123.fna_scaffold_11354_12
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(14581..14997)
DNA (417bp) protein (139aa)
50S ribosomal protein L13 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ17_PYRSN
50S ribosomal protein L13P
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
AB_1215_Bin_123.fna_scaffold_11354_13
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(15008..15373)
DNA (366bp) protein (122aa)
50S ribosomal protein L18e n=1 Tax=Thermococcus sp. AM4 RepID=B7R324_9EURY
Ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
AB_1215_Bin_123.fna_scaffold_11354_trna_1
unknown

Not on your lists

comp(15399..15508)
DNA (110bp)
transferRNA Leu
AB_1215_Bin_123.fna_scaffold_11354_14
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15522..16295)
DNA (774bp) protein (258aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
rpoD; DNA-directed RNA polymerase subunit D
DNA-directed RNA polymerase subunit D id=4922286 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AB_1215_Bin_123.fna_scaffold_11354_15
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(16297..16713)
DNA (417bp) protein (139aa)
30S ribosomal protein S11 n=3 Tax=Euryarchaeota RepID=RS11_PYRFU
30S ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
AB_1215_Bin_123.fna_scaffold_11354_16
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16728..17297)
DNA (570bp) protein (190aa)
30S ribosomal protein S4 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF0_METFV
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_1215_Bin_123.fna_scaffold_11354_17
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists


comp(17316..17732)
DNA (417bp) protein (139aa)
30S ribosomal protein S13 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS13_METKA
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
AB_1215_Bin_123.fna_scaffold_11354_18
unknown

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comp(18097..18309)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 23 items

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