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AB_1215_Bin_123.fna_scaffold_11354_14

Organism: AB_1215_Bin_123

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(15522..16295)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 259.0
  • Bit_score: 203
  • Evalue 3.60e-49
rpoD; DNA-directed RNA polymerase subunit D similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 259.0
  • Bit_score: 203
  • Evalue 7.20e-50
DNA-directed RNA polymerase subunit D id=4922286 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 259.0
  • Bit_score: 203
  • Evalue 1.90e-49

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Taxonomy

Methanocella paludicola → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 774
ATGAAACTCAAAATCCTAAACAAAAAAGACAGCGAACTCAAGCTCGAAATAGCAGACACCACACCCGCATTCGCAAACAGCCTCCGAAGAACAATAATCACAAGAACAAACACACTAGCCATAGACACAATAGACCTCCACATAAACACCTCAGCCCTCTACAACGAGATACTCGCCCACCGCATAGGCATGATCCCCCTCAAATTCAAAGACATCCTAAAAAGAACCGATGAATGCACATGCGAAGGCAAAGGCTGCATAAACTGCGAAGTAAAACTGGTCCTCAAAAAAAGCGGACCATGTACAGTCTACTCAAAAGACTTCAAATCCACAGACAAAGACATAAAACCAACAACCGGCAAAATACTCATAGCAAAACTCCTCGAGGATCAGGAAATAAGCCTCGAAGCAACAGCAAAACTCGGCACATGGTCAGAGCACGCCAAATGGCAATCCTCAAACATCGGCTACCACTACTACCCTGACCTAAAAACATCCAAAGACTGCGACATGTGTAAAACCTGCGCAAAAGCATGCCCAAAATCCATAATAGACACAACAACAAAAATAAAACTAAAAGACAACTACGAATGCGACCTCTGCGGCAAATGCGTTGACATATGCCCAAAAAAAGCACTGACACTCACAAAAGACCGCACAAGAATAATATTCACTGTAAAATCCGTATCTGGCCTGGAACCAAAAGACATCGTCACAGGCGCACTAAAAACACTAAAAGCAGACCTCAACGAATTATCAAAAGAAATAAAATAA
PROTEIN sequence
Length: 258
MKLKILNKKDSELKLEIADTTPAFANSLRRTIITRTNTLAIDTIDLHINTSALYNEILAHRIGMIPLKFKDILKRTDECTCEGKGCINCEVKLVLKKSGPCTVYSKDFKSTDKDIKPTTGKILIAKLLEDQEISLEATAKLGTWSEHAKWQSSNIGYHYYPDLKTSKDCDMCKTCAKACPKSIIDTTTKIKLKDNYECDLCGKCVDICPKKALTLTKDRTRIIFTVKSVSGLEPKDIVTGALKTLKADLNELSKEIK*