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AB_1215_Bin_123.fna_scaffold_11852

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_123.fna_scaffold_11852_1
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2..256
DNA (255bp) protein (85aa)
trpA; tryptophan synthase, alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC; 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum).;"
Tryptophan synthase alpha chain n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=TRPA_METTM
AB_1215_Bin_123.fna_scaffold_11852_2
unknown

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455..652
DNA (198bp) protein (66aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11852_3
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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662..1753
DNA (1092bp) protein (364aa)
Uncharacterized protein AF_2167 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y2167_ARCFU
hypothetical protein
Uncharacterized protein AF_2167; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM; 9628 / NBRC 100126).;"
AB_1215_Bin_123.fna_scaffold_11852_4

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1848..2414
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG13801.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
AB_1215_Bin_123.fna_scaffold_11852_5
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2411..2761
DNA (351bp) protein (117aa)
trpA; tryptophan synthase, alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC; 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum).;"
Tryptophan synthase alpha chain n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=TRPA_METTM
AB_1215_Bin_123.fna_scaffold_11852_6
unknown

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2795..3379
DNA (585bp) protein (195aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11852_7
CG_Micra_05, Micraarchaeota, Archaea

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3590..5137
DNA (1548bp) protein (516aa)
Tax=CG_Micra_05
AB_1215_Bin_123.fna_scaffold_11852_8
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5398..5976
DNA (579bp) protein (193aa)
permease n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6C37D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK72713.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
AB_1215_Bin_123.fna_scaffold_11852_9
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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5973..6509
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACW0_THEID
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH44751.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
AB_1215_Bin_123.fna_scaffold_11852_10
unknown

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6657..7343
DNA (687bp) protein (229aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11852_11
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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7485..8489
DNA (1005bp) protein (335aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGK2_METST
Tax=BJP_IG2069_Methanobacteriales_33_27
AB_1215_Bin_123.fna_scaffold_11852_12
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8522..8854)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBZ2_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI75114.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
AB_1215_Bin_123.fna_scaffold_11852_13

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comp(8839..9087)
DNA (249bp) protein (83aa)
AbrB family transcriptional regulator id=5044588 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
AbrB family transcriptional regulator {ECO:0000313|EMBL:KHO46322.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
AbrB family transcriptional regulator
AB_1215_Bin_123.fna_scaffold_11852_14
GWA2_WS6_37_6, WS6, Bacteria

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comp(9275..10135)
DNA (861bp) protein (287aa)
hypothetical protein id=5102636 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35982.1}; TaxID=1619087 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
AB_1215_Bin_123.fna_scaffold_11852_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10295..10507)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6ZAT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS44372.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
AB_1215_Bin_123.fna_scaffold_11852_16

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10606..12552
DNA (1947bp) protein (649aa)
DEAD/DEAH box helicase protein {ECO:0000313|EMBL:KHO51870.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative DNA helicase id=5800576 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DEAD/DEAH box helicase
AB_1215_Bin_123.fna_scaffold_11852_17
unknown

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12650..13675
DNA (1026bp) protein (342aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11852_18
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14067..15026)
DNA (960bp) protein (320aa)
DNA-binding protein {ECO:0000313|EMBL:KKH50490.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
ddf:DEFDS_0289 hypothetical protein id=128672 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
AB_1215_Bin_123.fna_scaffold_11852_19
CG_Woesearch_02, Woesearchaeota, Archaea

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15265..16758
DNA (1494bp) protein (498aa)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5T3_METSL id=5103640 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase alpha subunit
Tax=CG_Woesearch_02
AB_1215_Bin_123.fna_scaffold_11852_20
unknown

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16915..17058
DNA (144bp) protein (48aa)

This feature has no annotations

AB_1215_Bin_123.fna_scaffold_11852_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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17089..17802
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035D4421
methyltransferase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
AB_1215_Bin_123.fna_scaffold_11852_22

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17963..19477
DNA (1515bp) protein (505aa)
Phenylalanine--tRNA ligase beta subunit id=5800823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase beta subunit {ECO:0000313|EMBL:AJF62153.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Phenylalanine-tRNA ligase beta subunit
AB_1215_Bin_123.fna_scaffold_11852_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19602..19811
DNA (210bp) protein (70aa)
Prophage antirepressor id=4060582 bin=GWC2_OP3-like_45_7 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
AB_1215_Bin_123.fna_scaffold_11852_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19852..20013
DNA (162bp) protein (54aa)
Prophage antirepressor {ECO:0000313|EMBL:KCZ70587.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phage antirepressor protein
Putative uncharacterized protein id=3401161 bin=GWF2_Lentisphaerae_38_69 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
Displaying 24 items

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