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AB_1215_Bin_64.fna_scaffold_2982

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_64.fna_scaffold_2982_1
unknown

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comp(1..1419)
-----------------
DNA (1419bp)
protein (473aa)

This feature has no annotations

AB_1215_Bin_64.fna_scaffold_2982_2

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comp(1416..3065)
-----------------
DNA (1650bp)
protein (550aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55619.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
AB_1215_Bin_64.fna_scaffold_2982_3
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3176..4126)
-----------------
DNA (951bp)
protein (317aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Radical SAM protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLN1_THELI
radical SAM protein
AB_1215_Bin_64.fna_scaffold_2982_4
AR10, Diapherotrites, DPANN, Archaea

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4250..4525
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein
Putative uncharacterized protein id=5241452 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_64.fna_scaffold_2982_5
AR10, Diapherotrites, DPANN, Archaea

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comp(4559..5677)
-----------------
DNA (1119bp)
protein (373aa)
hypothetical protein
hypothetical protein id=5241453 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_64.fna_scaffold_2982_6
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(5705..6895)
-----------------
DNA (1191bp)
protein (397aa)
Digeranylgeranylglycerophospholipid reductase {ECO:0000256|HAMAP-Rule:MF_01287}; Short=DGGGPL reductase {ECO:0000256|HAMAP-Rule:MF_01287};; EC=1.3.99.34 {ECO:0000256|HAMAP-Rule:MF_01287};; 2,3-bis-O-geranylgeranylglyceryl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01287}; Geranylgeranyl reductase {ECO:0000256|HAMAP-Rule:MF_01287}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Digeranylgeranylglycerophospholipid reductase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKQ2_THEBM
digeranylgeranylglycerophospholipid reductase
AB_1215_Bin_64.fna_scaffold_2982_7
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(6914..7114)
-----------------
DNA (201bp)
protein (67aa)
4-oxalocrotonate tautomerase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6K2_KORCO
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ACB08081.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
AB_1215_Bin_64.fna_scaffold_2982_8
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7130..7306)
-----------------
DNA (177bp)
protein (59aa)
Ferredoxin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQQ5_METAC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AAM04899.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
AB_1215_Bin_64.fna_scaffold_2982_9
unknown

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7382..8398
-----------------
DNA (1017bp)
protein (339aa)

This feature has no annotations

AB_1215_Bin_64.fna_scaffold_2982_10
unknown

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8401..8574
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

AB_1215_Bin_64.fna_scaffold_2982_11
unknown

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comp(8621..9367)
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

AB_1215_Bin_64.fna_scaffold_2982_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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9445..9831
-----------------
DNA (387bp)
protein (129aa)
id=5048723 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_64.fna_scaffold_2982_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(9812..11101)
-----------------
DNA (1290bp)
protein (430aa)
hydrogenase/sulfur reductase, alpha subunit
hydrogenase/sulfur reductase, alpha subunit id=5240634 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_64.fna_scaffold_2982_14
Caldithrix abyssi, Caldithrix, Bacteria

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comp(11102..11866)
-----------------
DNA (765bp)
protein (255aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQX0_9BACT
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:EHO40064.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
AB_1215_Bin_64.fna_scaffold_2982_15
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(11869..12696)
-----------------
DNA (828bp)
protein (276aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=2107932 bin=GWD2_CPR2_39_7 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=CG_Dehalo_02
AB_1215_Bin_64.fna_scaffold_2982_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(12693..13700)
-----------------
DNA (1008bp)
protein (336aa)
Putative FAD and NAD-binding oxidoreductase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LJ19_THEPS
FAD and NAD-binding oxidoreductase
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_64.fna_scaffold_2982_17

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comp(13706..14902)
-----------------
DNA (1197bp)
protein (399aa)
3-phosphoglycerate kinase, phosphoglycerate kinase (EC:2.7.2.3)
Pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5241458 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_64.fna_scaffold_2982_18
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(14958..15962)
-----------------
DNA (1005bp)
protein (335aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABK52886.1}; EC=1.2.1.12 {ECO:0000313|EMBL:ABK52886.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Hymenobacter aerophilus RepID=UPI000375FA6C
AB_1215_Bin_64.fna_scaffold_2982_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(15993..17336)
-----------------
DNA (1344bp)
protein (448aa)
Phosphomannomutase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0V7_THERP
glmM; phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:ACM05655.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
AB_1215_Bin_64.fna_scaffold_2982_20
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(17344..18312)
-----------------
DNA (969bp)
protein (323aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=5043631 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
galactose-1-phosphate uridylyltransferase
Tax=CG_Woesearch_02
AB_1215_Bin_64.fna_scaffold_2982_21

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comp(18411..19475)
-----------------
DNA (1065bp)
protein (355aa)
Periplasmic copper-binding n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GK68_METPE
Uncharacterized protein {ECO:0000313|EMBL:CEG13985.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
periplasmic copper-binding protein
Displaying 21 items

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