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AB_3033_bin_152_scaffold_4672

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_152_scaffold_4672_1
unknown

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comp(217..462)
DNA (246bp) protein (82aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4672_2
unknown

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529..1254
DNA (726bp) protein (242aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4672_3

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1394..1702
DNA (309bp) protein (103aa)
large subunit ribosomal protein L21e
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5241026 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4672_4

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1704..2042
DNA (339bp) protein (113aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO55807.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55807.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=5241025 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
AB_3033_bin_152_scaffold_4672_5
AR10, Diapherotrites, DPANN, Archaea

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2078..2659
DNA (582bp) protein (194aa)
hypothetical protein
hypothetical protein; K07572 putative nucleotide binding protein id=5241024 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_6
AR10, Diapherotrites, DPANN, Archaea

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2687..3511
DNA (825bp) protein (275aa)
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5241023 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_7
AR10, Diapherotrites, DPANN, Archaea

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comp(3489..5012)
DNA (1524bp) protein (508aa)
thymidine phosphorylase (EC:2.4.2.4)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5241021 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_8

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comp(5044..5565)
DNA (522bp) protein (174aa)
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein containing YHS protein {ECO:0000313|EMBL:AJF60943.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
AB_3033_bin_152_scaffold_4672_9
Acinetobacter pittii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5562..6218)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Acinetobacter pittii ANC 4050 RepID=R8YHZ2_ACIPI
Uncharacterized protein {ECO:0000313|EMBL:EOQ67077.1}; TaxID=1217691 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter pittii ANC 4050.;"
phosphatase
AB_3033_bin_152_scaffold_4672_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6215..6916)
DNA (702bp) protein (234aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Tax=AR11
AB_3033_bin_152_scaffold_4672_11

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comp(6913..7539)
DNA (627bp) protein (209aa)
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase (EC:4.1.1.23 2.4.2.10); K13421 uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23] id=5241017 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4672_12

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comp(7520..8704)
DNA (1185bp) protein (395aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] id=5802107 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotase
AB_3033_bin_152_scaffold_4672_13
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8704..9510)
DNA (807bp) protein (269aa)
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AL84_METOI
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
AB_3033_bin_152_scaffold_4672_14

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comp(9503..10426)
DNA (924bp) protein (308aa)
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5241014 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4672_15
AR10, Diapherotrites, DPANN, Archaea

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comp(10432..10881)
DNA (450bp) protein (150aa)
aspartate carbamoyltransferase regulatory subunit
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit id=5241013 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_16
AR10, Diapherotrites, DPANN, Archaea

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comp(10878..11852)
DNA (975bp) protein (325aa)
hypothetical protein
putative aspartate carbamoyltransferase catalytic subunit id=5241012 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_17
CG_Woesearch_01, Woesearchaeota, Archaea

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11948..12460
DNA (513bp) protein (171aa)
Shikimate kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E877_METEZ
shikimate kinase
Tax=CG_Woesearch_01
AB_3033_bin_152_scaffold_4672_18
GWC1_OD1-i_45_18, Moranbacteria, Parcubacteria, Bacteria

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comp(12439..12804)
DNA (366bp) protein (122aa)
desulfoferrodoxin (EC:1.15.1.1)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037632E3
Desulfoferrodoxin {ECO:0000313|EMBL:KKU00869.1}; TaxID=1618696 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC1_45_18.;"
AB_3033_bin_152_scaffold_4672_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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comp(12828..13346)
DNA (519bp) protein (173aa)
Putative uncharacterized protein id=2504138 bin=GWC1_CPR2_39_9 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
AB_3033_bin_152_scaffold_4672_20
unknown

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comp(13457..14161)
DNA (705bp) protein (235aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4672_21
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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14211..14594
DNA (384bp) protein (128aa)
hypothetical protein
seg id=5241124 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
AB_3033_bin_152_scaffold_4672_22

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14740..15867
DNA (1128bp) protein (376aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ id=5241009 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4672_23
AR10, Diapherotrites, DPANN, Archaea

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15973..16143
DNA (171bp) protein (57aa)
secE; protein transport protein Ssubunit gamma-related protein
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5241008 bin=GW2011_AR10_complete species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_24

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16239..16679
DNA (441bp) protein (147aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5241007 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4672_25
AR10, Diapherotrites, DPANN, Archaea

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16696..17430
DNA (735bp) protein (245aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 id=5241006 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4672_26

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17530..18246
DNA (717bp) protein (239aa)
rpl1P; large subunit ribosomal protein L1
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5241005 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:AJF59996.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 26 items

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