ggKbase home page

Meg19_1012_Bin_61_scaffold_52871

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_61_scaffold_52871_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

44..574
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIJ3_9EURY id=137512 bin=ACD9 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=CG_Woesearch_01
Meg19_1012_Bin_61_scaffold_52871_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

600..887
DNA (288bp) protein (96aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
Meg19_1012_Bin_61_scaffold_52871_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(871..1476)
DNA (606bp) protein (202aa)
Protein chain release factor A n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NP69_ROTMD
protein chain release factor A
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg19_1012_Bin_61_scaffold_52871_4

Not on your lists

comp(1469..1984)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM20124.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg19_1012_Bin_61_scaffold_52871_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1986..2978)
DNA (993bp) protein (331aa)
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
Tax=AR15
Meg19_1012_Bin_61_scaffold_52871_6
unknown

Not on your lists

comp(3035..3250)
DNA (216bp) protein (72aa)

This feature has no annotations

Meg19_1012_Bin_61_scaffold_52871_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3258..3770)
DNA (513bp) protein (171aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
Tax=CG_Woesearch_01
Meg19_1012_Bin_61_scaffold_52871_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3772..3945)
DNA (174bp) protein (58aa)
hypothetical protein
id=5103297 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Meg19_1012_Bin_61_scaffold_52871_9

Not on your lists

comp(3947..4267)
DNA (321bp) protein (107aa)
Programmed cell death protein 5 {ECO:0000313|EMBL:KHO49879.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-binding TFAR19-related protein
Meg19_1012_Bin_61_scaffold_52871_10
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(4264..5097)
DNA (834bp) protein (278aa)
30S ribosomal protein S19e id=5800695 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S19
Tax=AR15
Meg19_1012_Bin_61_scaffold_52871_11
unknown

Not on your lists

5525..5677
DNA (153bp) protein (51aa)

This feature has no annotations

Meg19_1012_Bin_61_scaffold_52871_12

Not on your lists

5674..5865
DNA (192bp) protein (64aa)
Marine sediment metagenome DNA, contig: S12H4_L05252 {ECO:0000313|EMBL:GAI85299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5041610 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cold shock DNA binding domain-containing protein
Meg19_1012_Bin_61_scaffold_52871_13
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5993..6823
DNA (831bp) protein (277aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
DEAD/DEAH box helicase-like protein
DEAD-box RNA helicase {ECO:0000313|EMBL:AAF89099.1}; TaxID=29291 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii.;"
Displaying 13 items

View Taxonomy