ggKbase home page

Meg22_1012_Bin_199_scaffold_11421

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_199_scaffold_11421_1

Not on your lists

3..392
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS89346.1}; TaxID=1618908 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11b.;"
Meg22_1012_Bin_199_scaffold_11421_2

Not on your lists

489..1076
-----------------
DNA (588bp)
protein (196aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor A1
Meg22_1012_Bin_199_scaffold_11421_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

1251..1895
-----------------
DNA (645bp)
protein (215aa)
UPI0002893CB3 related cluster id=5044041 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
Meg22_1012_Bin_199_scaffold_11421_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

1892..3031
-----------------
DNA (1140bp)
protein (380aa)
Glycosyl transferase group 1 id=5799630 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
group 1 glycosyl transferase
Tax=AR15
Meg22_1012_Bin_199_scaffold_11421_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3015..6506)
-----------------
DNA (3492bp)
protein (1164aa)
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
Tax=CG_Woesearch_01
Meg22_1012_Bin_199_scaffold_11421_6

Not on your lists


6633..7877
-----------------
DNA (1245bp)
protein (415aa)
cca; tRNA adenylyltransferase (CCA-adding enzyme) (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=5046908 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01264}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA nucleotidyltransferase CCA-adding enzyme
Meg22_1012_Bin_199_scaffold_11421_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7920..8387
-----------------
DNA (468bp)
protein (156aa)
id=5046787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8429..8890
-----------------
DNA (462bp)
protein (154aa)
ligand-binding protein SH3 n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A18A26
membrane protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8902..9453
-----------------
DNA (552bp)
protein (184aa)
phosphoesterase id=5049617 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Membrane-associated phospholipid phosphatase
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9429..10022
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein id=5046627 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10024..11040)
-----------------
DNA (1017bp)
protein (339aa)
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NMD3-related protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11140..11778
-----------------
DNA (639bp)
protein (213aa)
Peptidase S26B, eukaryotic signal peptidase id=5799718 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11782..12099
-----------------
DNA (318bp)
protein (106aa)
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative DNA-directed RNA polymerase subunit M
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12099..12341
-----------------
DNA (243bp)
protein (81aa)
UPF0235 protein MSWAN_0547 id=5799721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12342..13475)
-----------------
DNA (1134bp)
protein (378aa)
Genomic DNA, chromosome 3, BAC clone: T19N8 n=1 Tax=Arabidopsis thaliana RepID=Q9LH98_ARATH
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13637..13837
-----------------
DNA (201bp)
protein (67aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI00036EF93E
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_17
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13850..14194
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein id=4399893 bin=GWF2_Ignavibacteria_35_20 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Meg22_1012_Bin_199_scaffold_11421_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14237..14722
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000371A694
hypothetical protein
Tax=CG_Woesearch_02
Meg22_1012_Bin_199_scaffold_11421_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14719..15378)
-----------------
DNA (660bp)
protein (220aa)
Phosphoglycerate kinase id=5800369 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
triosephosphate isomerase
Tax=CG_Woesearch_02
Displaying 19 items

View Taxonomy