ggKbase home page

Meg22_1214_Bin_123_scaffold_10174

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_123_scaffold_10174_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2..1036)
DNA (1035bp) protein (345aa)
hypothetical protein id=5040586 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_10174_2
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

1096..2511
DNA (1416bp) protein (472aa)
Cysteine-tRNA ligase {ECO:0000313|EMBL:KKU14011.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Cysteine--tRNA ligase id=4207961 bin=GWF2_Planctomycetes_42_9 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
cysteinyl-tRNA synthetase
Meg22_1214_Bin_123_scaffold_10174_3
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

2490..3272
DNA (783bp) protein (261aa)
beta-lactamase n=1 Tax=Methanobrevibacter smithii RepID=UPI00036F76AF
Uncharacterized protein {ECO:0000313|EMBL:EFC93538.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
beta-lactamase superfamily hydrolase
Meg22_1214_Bin_123_scaffold_10174_4
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3262..5745)
DNA (2484bp) protein (828aa)
Regulator of chromosome condensation id=1827749 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
Meg22_1214_Bin_123_scaffold_10174_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

5824..8748
DNA (2925bp) protein (975aa)
ATP dependent helicase, Lhr family id=3895731 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ATP dependent helicase, Lhr family
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_10174_6
unknown

Not on your lists

comp(8723..10030)
DNA (1308bp) protein (436aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_10174_7
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10235..11059
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q425_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ74768.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
hypothetical protein
Meg22_1214_Bin_123_scaffold_10174_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(11088..11846)
DNA (759bp) protein (253aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWN8_METCG
Ser/Thr protein phosphatase family protein
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_123_scaffold_10174_9
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11876..12799)
DNA (924bp) protein (308aa)
Translation initiation factor IF-2B subunit delta n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH97_PYRYC
Ribose-1,5-bisphosphate isomerase
Ribose-1,5-bisphosphate isomerase {ECO:0000313|EMBL:AHF80708.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
Meg22_1214_Bin_123_scaffold_10174_10
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(12828..13751)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFA0_9ARCH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_1214_Bin_123_scaffold_10174_11
unknown

Not on your lists

comp(13748..14848)
DNA (1101bp) protein (367aa)

This feature has no annotations

Meg22_1214_Bin_123_scaffold_10174_12
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(14920..15984)
DNA (1065bp) protein (355aa)
hypothetical protein id=88741 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=CG_CPR10_02
Meg22_1214_Bin_123_scaffold_10174_13
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

16200..17627
DNA (1428bp) protein (476aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BP8_METBF
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_13_Nitrospirae_43_8_curated
Meg22_1214_Bin_123_scaffold_10174_14
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


17629..17970
DNA (342bp) protein (114aa)
30S ribosomal protein S3Ae n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXA4_METFV
rps3ae; 30S ribosomal protein S3Ae
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Displaying 14 items

View Taxonomy