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Meg22_1214_Bin_175_scaffold_16519

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_175_scaffold_16519_1
unknown

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3..887
DNA (885bp) protein (295aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_16519_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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975..2270
DNA (1296bp) protein (432aa)
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_175_scaffold_16519_3
AR20, Woesearchaeaota, DPANN, Archaea

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comp(2301..3086)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg22_1214_Bin_175_scaffold_16519_4
unknown

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comp(3086..3256)
DNA (171bp) protein (57aa)
UPI000021D016 related cluster id=5800825 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Meg22_1214_Bin_175_scaffold_16519_5

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comp(3262..4059)
DNA (798bp) protein (266aa)
Translation initiation factor 2 subunit 1 {ECO:0000313|EMBL:KHO52400.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
translation initiation factor IF-2
Meg22_1214_Bin_175_scaffold_16519_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4114..4305)
DNA (192bp) protein (64aa)
30S ribosomal protein S27e id=5800827 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S27e
Tax=CG_Woesearch_02
Meg22_1214_Bin_175_scaffold_16519_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(4336..4644)
DNA (309bp) protein (103aa)
LSU ribosomal protein l44e; K02929 large subunit ribosomal protein L44e id=5047463 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
LSU ribosomal protein L44E
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1214_Bin_175_scaffold_16519_8

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comp(4641..5231)
DNA (591bp) protein (197aa)
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53360.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Meg22_1214_Bin_175_scaffold_16519_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5233..6585)
DNA (1353bp) protein (451aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5041758 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
Meg22_1214_Bin_175_scaffold_16519_10
unknown

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comp(6684..7544)
DNA (861bp) protein (287aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_16519_11
unknown

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comp(7601..7930)
DNA (330bp) protein (110aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_16519_12
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8021..8494)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0H2_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHP84867.1}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
hypothetical protein
Meg22_1214_Bin_175_scaffold_16519_13

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comp(8609..10672)
DNA (2064bp) protein (688aa)
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator Cdc21/Cdc54
DNA replication initiator Cdc21/Cdc54 {ECO:0000313|EMBL:AJF62505.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_1214_Bin_175_scaffold_16519_14

Not on your lists

comp(10803..11942)
DNA (1140bp) protein (380aa)
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256|HAMAP-Rule:MF_01508}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor C large subunit
Meg22_1214_Bin_175_scaffold_16519_15
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(11944..12906)
DNA (963bp) protein (321aa)
Replication factor C small subunit n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9H4_METFA
rfc; replication factor C small subunit
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
Meg22_1214_Bin_175_scaffold_16519_16
unknown

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13017..13118
DNA (102bp) protein (34aa)

This feature has no annotations

Meg22_1214_Bin_175_scaffold_16519_17

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13611..16736
DNA (3126bp) protein (1042aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Isoleucine-tRNA ligase {ECO:0000313|EMBL:AJF61934.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Meg22_1214_Bin_175_scaffold_16519_18
AR4, Woesearchaeaota, DPANN, Archaea

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16950..17501
DNA (552bp) protein (184aa)
TATA-box-binding protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWR1_9EURY
TATA-box-binding protein
Tax=AR4
Meg22_1214_Bin_175_scaffold_16519_19
CG_Woesearch_02, Woesearchaeota, Archaea

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17647..17826
DNA (180bp) protein (60aa)
Protein containing 4Fe-4S binding domain n=1 Tax=sediment metagenome RepID=D9PK77_9ZZZZ
Ferredoxin
Tax=CG_Woesearch_02
Meg22_1214_Bin_175_scaffold_16519_20
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

17886..20798
DNA (2913bp) protein (971aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermosphaera.;" source="Thermosphaera aggregans (strain DSM 11486 / M11TL).;"
Phosphoenolpyruvate synthase n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U106_THEAM
Meg22_1214_Bin_175_scaffold_16519_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(20859..22775)
DNA (1917bp) protein (639aa)
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1214_Bin_175_scaffold_16519_22

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22854..23174
DNA (321bp) protein (107aa)
Marine sediment metagenome DNA, contig: S12H4_S08337 {ECO:0000313|EMBL:GAI88549.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1214_Bin_175_scaffold_16519_23

Not on your lists

23295..23891
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722A11
Uncharacterized protein {ECO:0000313|EMBL:KHO52217.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Meg22_1214_Bin_175_scaffold_16519_24

Not on your lists

23888..24625
DNA (738bp) protein (246aa)
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61196.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
Meg22_1214_Bin_175_scaffold_16519_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(24618..25787)
DNA (1170bp) protein (390aa)
hypothetical protein id=5091354 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_175_scaffold_16519_26
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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25972..26223
DNA (252bp) protein (84aa)
ATPase involved in chromosome partitioning n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCU6_9EURY
ATPase involved in chromosome partitioning
Tax=BJP_IG2069_Spirochaetales_48_31
Displaying 26 items

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